Ramlibacter tataouinensis: Rta_13680
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Entry
Rta_13680 CDS
T01544
Symbol
gyrA
Name
(GenBank) Candidate DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rta03032
]
Rta_13680 (gyrA)
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_13680 (gyrA)
Enzymes [BR:
rta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rta_13680 (gyrA)
DNA replication proteins [BR:
rta03032
]
Prokaryotic type
DNA Topoisomerases
Rta_13680 (gyrA)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rta_13680 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEG92454
UniProt:
F5Y3I0
LinkDB
All DBs
Position
complement(1429363..1431999)
Genome browser
AA seq
878 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSKLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLKNPQASLEELMEIVPAPDFPTAGIIYGINGVKEGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVNEKKLEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLVDIFLQHRRE
VVTRRTVYNLRRARERGHVLEGLAVALANIDEFIRIIRQAPTPPVAKAELMNRPWDSSLV
RQMLTRAREDGSVVNADDYRPEGLDRQYGLGGDGLYRLSDTQASEILQMRLQRLTGLEQD
KIVAEYKDVMAEIEDLLDILARPARVATIIGEELTALKQEFGQTKIGARRSVVEHNAQDL
ATEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD
WILCFSNRGRMYWLKVWEVPAGSRGSRGRPIVNMFPLAEGEKINVVLPLTGEFRSFPADH
YVFMATSMGTVKKTALNEFSNPRKAGIIAVDLDPGDYLIGASLTDGKHDVMLFSDGGKAV
RFDENDVRPMGRAARGVRGMTLEDGQSVIAMLVAEDESQSVLTATVNGFGKRTPITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT
LIGLDEGSKLSGLQRIVENDAQAAEGEPADAAPGDSED
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgccaaggaaacactgcccatcagcctcgaagaggagatgcggcgcagc
tacctcgattacgccatgagcgtgatcgtcggacgggccctgcccgatgcccgtgacggg
ctcaagccggtgcaccggcgcgtgctgtacgcgatgcatgagctcaacaacgactggaac
cggccgtacaagaaatcggcccgcatcgtcggcgacgtcatcggcaagtaccacccgcac
ggcgaccagtccgtctacgacaccatcgtgcggctggcgcaggacttctccatgcgccac
atgctggtggacggccagggcaacttcggctcggtcgacggcgacaacgccgcggccatg
cgctacaccgagatccgcctggccaagatcgcgcacgagatgctggccgacatcgacaag
gagacggtcgacttcggccccaactacgacggcagcgagaaggagccgctggtcctgccg
tccaagctgcccaacctgctggtcaacggctcgggcggcatcgcggtgggcatggccacc
aacatcccgccgcacaacctcaatgaggtggtggacgcctgcctgcacctgctgaagaac
ccgcaggcctcgctcgaagagctgatggagatcgtgccggcgccggacttccccaccgcc
ggcatcatctacggcatcaacggggtcaaggaaggctaccgcaccggccgcggcaaggtg
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggccatcatc
gtcgatgagctgccctaccaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtcaacgagaagaagctcgagggcatcagccacatccaggacgagagcgacaagtcgggc
atgcgcctggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctgaacaacctc
tacaagcagacccagctgcaggacaccttcggcatcaacatggtggccctggtggacggc
cagcccaagctgtgcaacctgaaggacctggtcgacatcttcctgcagcaccgccgcgag
gtggtcacgcggcgcaccgtctacaacctgcgcagggcgcgcgagcgcggccatgtgctg
gaaggcctggcggtggcgctggccaacatcgacgagttcatccgcatcatccggcaggcg
cccaccccgccggtggccaaggccgagctgatgaaccggccctgggactccagcctggtg
cgccagatgctcacccgcgcgcgcgaggacggcagcgtggtcaacgccgacgactatcgc
ccggaggggctggaccggcagtacggcctgggcggcgacggcctgtaccgcctgtccgac
acgcaggcctccgagatcctgcagatgcgcctgcagcgcctgaccggcctggagcaggac
aagatcgtcgccgagtacaaggacgtgatggccgagatcgaggacctgctcgacatcctg
gccaggccggcgcgggtggccaccatcatcggcgaggagctcaccgcgctgaagcaggag
ttcggccagaccaagatcggcgcgcgccgctccgtggtcgagcacaacgcccaggacctg
gccaccgaggacctgatcacgcccaccgacatggtggtcacgctcagccattcgggctac
atcaagagccagccgctgtcggagtaccgcgcgcaaaagcgcggcggccgcggcaagcag
gcgaccgcgaccaaggaagacgactgggtcgaccagctgttcatcgccaacacgcacgac
tggatcctgtgcttctccaaccgcggccgcatgtactggctcaaggtctgggaagtgccg
gccggctcgcgcggctcgcgcggccggcccatcgtcaacatgttcccgctggccgagggc
gaaaagatcaacgtggtgctgccgctgaccggcgagttccgcagcttcccggccgaccac
tacgtgttcatggccacctccatgggcacggtgaagaagactgcgctgaacgagttcagc
aacccgcgcaaggccggcatcatcgcggtcgacctggacccgggcgactatctcatcggc
gcatcgctgaccgacggcaagcacgacgtgatgctgttctccgacggcggcaaggccgtg
cgcttcgacgagaacgacgtccgccccatgggccgcgccgcccgcggcgtgcgcggcatg
acgctggaggacggccagagcgtgatcgccatgctggtggccgaggacgagtcgcagtcc
gtgctcaccgccaccgtcaacggcttcggcaagcgcacgcccatcaccgagtacacgcgc
catggccgcggcaccaagggcatgatcgccatccagcagagcgagcgcaacggcaaggtg
gtggccgccacgctggtgcatgccgacgacgagatcatgctgatcaccgacaagggcgtg
ctggtgcgcacccgcgtcagcgagatccgcgagctcggccgcgcgacccagggcgtgacg
ctgatcgggttggacgagggctccaagctcagcggcctgcagcgcatcgtggagaacgac
gcgcaggcggccgaaggcgaaccggccgacgccgcccccggcgacagcgaagactga
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