Ramlibacter tataouinensis: Rta_14470
Help
Entry
Rta_14470 CDS
T01544
Symbol
xthA
Name
(GenBank) Candidate exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rta_14470 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_14470 (xthA)
Enzymes [BR:
rta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rta_14470 (xthA)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rta_14470 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEG92538
UniProt:
F5Y473
LinkDB
All DBs
Position
complement(1514717..1515496)
Genome browser
AA seq
259 aa
AA seq
DB search
MKISTWNVNSLTARLQHVLDWLAANPVDVLCLQELKLTDDKFPLDAVREAGYPHCAVFGQ
KTYNGVAILSRAPVRDVARNIAGFEDEHSRVIAATVDAPGGELRIVNGYFVNGQAPGTDK
FTYKMDWLGGLQRYMADELARHPRLVLLGDFNIAPEDRDSFDPEGLHETIHHTTQEREHF
GRLLSLGLCDSFRLFEQPEKSFSWWDYRMLGYQKNRGLRIDHILVSEALRPLVKACAIDR
TPRKWKQPSDHAPVTVDIG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcagcacctggaacgtcaactccctcaccgcccgcctgcagcacgtgctggac
tggctggccgccaacccggtcgacgtgctgtgcctgcaggagctcaagctcaccgacgac
aagttcccgctggacgcggtgcgcgaggccggctatccgcattgcgccgtgttcgggcag
aagacctacaacggcgtggccatcctcagccgcgcgccggtgcgcgacgtcgcccgcaac
atcgccggcttcgaggacgagcactcgcgcgtgatcgccgccaccgtggacgcacccggc
ggcgagctgcgcatcgtcaacggctacttcgtcaacggccaggcgccgggcacggacaag
ttcacctacaagatggactggctgggcggcctgcagcgctacatggccgacgagctcgcc
cggcatccgcggctggtgctgctgggcgacttcaacatcgcgccggaagaccgcgactcc
ttcgaccccgagggcctgcacgagaccatccaccacaccacgcaggagcgcgagcatttc
ggccggctgctgtccctaggcctgtgcgacagcttccgcctgttcgagcagcccgagaag
agcttcagctggtgggactaccgcatgctgggctaccagaagaaccgcggcctgcgcatc
gaccacatcctggtgagcgaggcgctgcggccgctggtgaaggcctgcgccatcgaccgc
acgccgcgcaagtggaagcagccgagcgaccatgcgccagtgacggtcgacatcggctag
DBGET
integrated database retrieval system
