Ramlibacter tataouinensis: Rta_19610
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Entry
Rta_19610 CDS
T01544
Symbol
truB
Name
(GenBank) Uracil hydrolyase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rta03016
]
Rta_19610 (truB)
Enzymes [BR:
rta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rta_19610 (truB)
Transfer RNA biogenesis [BR:
rta03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rta_19610 (truB)
Prokaryotic type
Rta_19610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEG93053
UniProt:
F5XXR8
LinkDB
All DBs
Position
2074126..2075058
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AA seq
310 aa
AA seq
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MHGVLLLDKPRGLSSNDALQKAKWLLRAEKAGHTGTLDPLATGVLPLCFGAATKFSQLHL
EADKTYEAVAVLGVKTTTGDAEGEVVSRQPAPELTADRLAQVQRQFTGALSQVPPMHSAL
KKDGKALYEYARAGEEVAREARAIMVHALELAAARTGSGQAAVRFIAKVSKGTYIRTLGE
DIGEALGCGAHLSLLRRLATGPFDLSQCVTLEALQDMAEDERLARLLPPQALLAGHGRVT
LDADNAGRFLSGLRRRGDWPDSEAVAVFGEQPPALLGTGHVKAGELIPGRLLSPIEIQQI
LHPQEQATTP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggggtgctgctgctcgacaagcccaggggcctgtcgagcaacgacgccttgcag
aaggccaaatggctgctgcgggcggagaaggccggccacaccggcacgctggacccgctg
gccaccggcgtgctgccgctgtgcttcggcgccgccaccaagttcagccagctgcatctg
gaggcggacaagacctacgaggccgtcgcggtgctgggcgtgaagaccacgaccggcgac
gcggagggcgaggtggtttcgcgccagccggcgcccgagctgacggccgacaggctggcc
caggtgcaacgccagttcaccggggcgctgagtcaggtgccgcccatgcacagtgcgctg
aagaaggacggcaaggcgctgtacgaatacgcccgggcaggcgaagaggtcgcccgggaa
gcgcgcgccatcatggtccatgcgctggaactggccgcggcccgcaccgggtcgggacag
gcagccgtgcgctttatcgccaaggtcagcaagggaacctacatccgcaccctgggcgag
gacatcggcgaggcgctgggctgcggcgcgcacctgtccctgctgcgccggctggcgacc
gggcccttcgacctgtcgcagtgcgtgaccctggaggcgcttcaggacatggccgaggac
gagcgcctggcccgcctgctgccgccccaggccctgctggccggccacggccgtgtcacg
ctggacgccgacaatgccggccgcttcctctccggcctgcgccgtcgaggcgactggccg
gacagcgaggcggtggcggtgttcggcgaacaaccgccggcgctgctaggcaccggccac
gtcaaggccggcgaactgatcccggggcgtctgctgagccccatcgaaatccagcaaatc
ctgcacccgcaagaacaggcgaccaccccatga
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