Ramlibacter tataouinensis: Rta_20050
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Entry
Rta_20050 CDS
T01544
Name
(GenBank) 3-hydroxybutyryl-CoA epimerase-like protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00071
Fatty acid degradation
rta00362
Benzoate degradation
rta00650
Butanoate metabolism
rta01100
Metabolic pathways
rta01120
Microbial metabolism in diverse environments
rta01200
Carbon metabolism
rta01212
Fatty acid metabolism
Module
rta_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rta_20050
09103 Lipid metabolism
00071 Fatty acid degradation
Rta_20050
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rta_20050
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rta_20050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
ApbA
F420_oxidored
Pyr_redox
NAD_Gly3P_dh_N
NAD_binding_7
RanGAP1_C
DXP_synthase_N
Motif
Other DBs
NCBI-ProteinID:
AEG93097
UniProt:
F5XXW2
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All DBs
Position
complement(2114758..2116860)
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AA seq
700 aa
AA seq
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MTAEYKVHGDVAVITMNNPPVNGLGLATRVALTQGLEKANADGSVKAIVITGAGKAFSGG
ADIKEFGTPKAVAEPNLLSVILAMENSSKPVVAAIHSVAMGGGLELSLGCHYRIAAPGAN
IALPEVKLGLIPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLAQQPGQKLFDKMASSA
QALQEEALAFARSVADTRPLPLVRNLPCKHPQGDAYFQFARNMVKGMAKNFPAPVKCVDA
VEFATRKKFDEGMTLEREIFTNLMFTPESRALRHIFMAERAASKIPDVPEDTPQREIKAV
AVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGISTIRKNYEAQIKKGKLKQDKYEQ
RMSLLKTTLDYQDLAQADLVIEAVFEEMGVKQKVFETLDGVMKKGAILASNTSTLDVNKI
AAFTKRPQDVVGMHFFSPANVMKLLEVVRGGKTAKDVLATVMQLAKKIKKTAVVSGVCDG
FIGNRMIEQYSRQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRA
TERADMKYSRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSKLVEDMIAAHRKELGIEP
RKISDEEIVQRLVYALVNEGAHILEEGIASRASDIDMVYLTGYGFPIHRGGPMLYADQVG
LFNVMQAMKRFQQNPRDDAKFWEPAPLIKRLVAEGKTFNG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaatacaaggtgcacggcgacgtcgccgtgatcacgatgaacaacccgccc
gtcaacggactgggcctggccacccgcgtggcgctcacccagggcctggagaaggccaat
gccgatggcagcgtcaaggccatcgtcatcaccggcgcgggcaaggccttctccggcggc
gccgacatcaaggagttcggcacccccaaggcagtggcggaacccaacctgctgtccgtg
atcctggcgatggagaactcgtccaagccggtggtggccgcgatccactccgtggccatg
ggcggcggcctcgagctttcgctgggctgccattaccgcatcgccgcgccgggcgccaac
atcgcgctgccagaggtgaagctgggcctgatccccggtgccggcggcacgcagcgcctg
ccgcgcgtgctgggcgtcgagaccgcgctcaacatgatcgtcagcggcgagccggtcaag
agcgagctgctggcgcagcagccgggccagaagctgttcgacaagatggcatcctcggcg
caggccctgcaggaagaggccctggcattcgcccgctcggtggcggacacgcggcccctg
ccgctggtgcgcaacctgccgtgcaagcatccccagggcgacgcctacttccagttcgcg
cgcaacatggtcaagggcatggccaagaacttcccggcgccggtcaagtgcgtggacgcc
gtggagttcgccaccaggaagaagttcgacgagggcatgacgctcgagcgcgagatcttc
accaacctgatgttcacgcccgagagccgggcgctgcgccacatcttcatggccgaacgc
gcggccagcaagatccctgatgtcccggaagacacgccgcagcgcgagatcaaggccgtg
gccgtgatcggcgccggcaccatgggcggcggcatctccatgaacttcctgaacgccggc
atcccggtcaccatcctcgagatgaagcaggaggcgctggaccgcggcatctccaccatc
cgcaagaactatgaggcccagatcaagaagggcaagctcaagcaggacaagtacgagcag
cgcatgtccctgctcaagaccacgctggactaccaggacctggcgcaggccgaccttgtg
atcgaggccgtgttcgaggagatgggcgtcaagcagaaggtgttcgagacgctggacggc
gtgatgaagaagggcgccatcctggcctccaacacctccaccctggacgtcaacaagatc
gccgccttcaccaagcgcccgcaggacgtggtcggcatgcacttcttcagcccggccaac
gtgatgaagctgctggaggtggtgcgcggcggcaagacggcgaaggacgtgctggccacc
gtgatgcagctggccaagaagatcaagaagaccgccgtggtttccggcgtgtgcgacggc
ttcatcggcaaccgcatgatcgagcagtacagccgccaggccggcttcctgctggacgaa
ggcgccacgccgcagcaggtggacaaggccatcgagaagttcggcttcgccatgggcccg
ttccgcatgggcgacctggccggcaacgacatcggctgggccatccgcaagcgccgcgcc
accgagcgcgccgacatgaagtacagccgcaccgccgacaagctgtgcgagctgggccgc
ttcggccagaagaccggcgccggctggtacgactaccaggccggcaagcgcgacgccatc
ccctccaagctggtggaggacatgatcgccgcgcaccgcaaggaactgggcatcgagccg
cgcaagatctccgacgaggagatcgtccagcgcctggtctacgccctggtcaacgagggc
gcgcacatcctggaggaaggcatcgcctcgcgcgccagcgacatcgacatggtgtacctc
accggctacggcttccccatccaccgcggcggccccatgctgtatgccgaccaggtgggc
ctgttcaacgtgatgcaggccatgaagcgcttccagcagaacccgcgggacgacgcgaag
ttctgggagccggccccgctgatcaagcgcctggtcgccgaaggcaagaccttcaacggc
tga
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