Ramlibacter tataouinensis: Rta_20805
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Entry
Rta_20805 CDS
T01544
Name
(GenBank) transcriptional regulator, LysR family-like protein
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rta03000
]
Rta_20805
Transcription factors [BR:
rta03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rta_20805
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
SMN_G2-BD
Motif
Other DBs
NCBI-ProteinID:
AEG93174
UniProt:
F5XYJ8
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Position
complement(2196910..2197821)
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AA seq
303 aa
AA seq
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MINYKHLHYFWAVAQAGGVVKAGERLHVTPQTLSAQIKLLEERLGQQLLRKVGRGVELTA
AGRLALRYADEIFAAGAELEQALRGEGGGRGAGPVARFSVGVADSVPKSIAYHVLEPAMR
LRPAMRMLCSEGKLSSLLGELAVHRLDLVISDVPLPAQVSVKAFSHVLGKSGTSFFAGPA
LLKAHRGGLRFPQVLERLPLLLPGPDSAVRPRLEAWLREQGLQPPVAGEFDDSALVKAFG
REGGGVFVAPTVLEAEIRRQYGVSVVGRADDLAVEFYAISIERRITHPAVAAITNAARRQ
LFT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactacaagcacctgcactacttctgggcggtggcccaggccggcggggtggtc
aaggccggcgagcggttgcacgtcacgccgcagaccctgagcgcccagatcaagctgctg
gaggagcgcctgggccagcagctgctgcgcaaggtggggcgcggcgtggaactcacggcc
gccggccggctggccctgcggtacgccgacgagatcttcgcggccggcgccgagctggag
caggcgctgcgcggcgagggcggcgggcgcggcgcgggcccggtggcgcgctttagcgtc
ggcgtggccgactccgtgccgaagtcgatcgcctatcacgttctggagccggcgatgcgg
ctgcggccggccatgcggatgctgtgcagcgaaggcaagctgtccagcctgctgggcgag
ctggccgtgcaccgcctggacctggtgatctcggacgtgccgctacccgcccaggtgagc
gtcaaggcattcagccacgtgctgggcaagtcgggcaccagcttttttgctggacccgca
ttgctcaaggcgcaccgtggcgggctgcgtttcccgcaggtgctggagcggctgccgttg
ctgctgccggggccggactcggcggtgcggccacggctggaagcctggctgcgtgagcag
gggctgcaaccgcccgtggcgggcgaattcgacgacagtgccctggtcaaggcgttcggg
cgcgaaggcggcggcgtgttcgtcgcgcccacggtgctggaggcggaaatccgccggcag
tacggcgtttcggtcgttggccgggccgacgacctggccgtggagttctacgcgatctcg
atcgagcggcgcatcacccacccggccgtcgccgccatcaccaacgcggcgcggcgccag
ctgttcacttga
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