KEGG   Ramlibacter tataouinensis: Rta_21360
Entry
Rta_21360         CDS       T01544                                 
Name
(GenBank) type I site-specific deoxyribonuclease-like protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rta  Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:rta00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rta02048]
    Rta_21360
Enzymes [BR:rta01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Rta_21360
Prokaryotic defense system [BR:rta02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Rta_21360
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like DEAD
Other DBs
NCBI-ProteinID: AEG93232
UniProt: F5XZ62
LinkDB
Position
complement(2259586..2262732)
AA seq 1048 aa
MSLHTEIRFEEDICAHLAASGWLHAPGDARHYDVSRALYAPDLLAWVQGTQPQAWETLAK
NHGAAAEAMLLDRLRKQLDERGTLEVLRFGIEMLGLRQPLQLAQFKPALAMNADLQARYA
ANRLRVVRQVPTGHGDIIDLVLFLNGLPVATVEIKCNFTQDVNDAVDQYRNDRQPRPKGK
PSAEPLLDFPRGALVHFALSNSSVFMTTRLQGLATQFLPFNIGNEGAAGNPVNPHGHRTA
YLWEQVWQRDSWLEILGRYLVAQRDGRKQVKAVLFPRYHQLDATRRLLAAVRAEGPGGKY
LIQHSAGSGKTNSIAWAAHFLADLHDPQHRKLFDTVLVVSDRNVLDAQLQEAIFGFERTA
GVVATIKGEGGSKSGELAEALSGGKKIVVCTIQTFPAIHKKMSELASQEGKRFAVIADEA
HSSQTGEAASKLKEVLGVDEQRDLADGGGVSAEDVVLAAQMAARANAAGITYIAFTATPK
AKTLELFGRRPSPEHPAGPDNLPAPFHVYSMRQAIEEGFILDVLRNYTPYKLAFKLANEG
REWDEKEVERSTAMKGLMRWVRLHPHNISQKVAVVVEHFRQNVQPLLDGHAKAMVVLGSR
AEAVRWQLAVTKYIQDNGYPLRTLVAFSGEVSVPDLLPDVVSEAASALNPNLKGRGIREA
FATDEYQLLLVANKFQTGFDQPLLCGMYVDKRLAGIQAVQTLSRLNRAYSGLHGVKDETY
VLDFVNEPDEVLAAFKTYYATAELAGVTDPNLVFDLRAKLDATGHYDEFEVDRVARAELD
PKGTQAALVAAIEPVADRLLRWYKAAAEVLAAAESATAGVDSQAAQQAKDTVNALILFKR
DLGTFGRVYAFLSQMFDYGNTAIEKRAIFFKRLLPLLEFGREREGIDLSKVVLTHHRLKD
LGGRRLALSVSEPGADYKLQPLGEAGGGDVQDKQKALLSEIVELVNELFDGEVTDDDKLV
YVNHVIKGKLLESDLLVRQAMNNTKGQFHNSPDLGSQLIEAIMGASSANESMTAQALASE
RVRRGLLDILMGPGRLYEALRERRSPGE
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgagcctgcacacggaaatccggttcgaggaggacatctgcgcccacctggccgcgagc
ggctggcttcatgcgccaggcgacgcccggcactacgacgtgtcccgcgccctctacgcg
cccgacctgctcgcctgggtgcagggcacgcagccgcaagcctgggaaaccctggcgaag
aaccacggcgcggcggccgaagccatgctgctggatcgcctgcgcaagcagctggacgag
cgcggcacgctggaggtgctgcgcttcggcatcgagatgctgggcttgcgccagccgctg
cagctggcgcagttcaagcccgcgctggcgatgaacgctgacctgcaggcgcgctatgcc
gccaaccggctgcgcgtggtgcggcaggtgcccaccggccacggcgacatcatcgacctg
gtgctgttcctcaacggcttgccggtggccacggtggagatcaagtgcaacttcacgcag
gacgtgaacgatgccgtggaccagtaccgcaacgatcggcagccacggcccaagggcaag
ccgtcggccgagccgctgctggatttcccgcgcggagcgctggtgcatttcgcgctgagc
aacagcagcgtcttcatgaccacccgcctgcaagggctggccacgcagttcctgccgttc
aacatcggcaacgaaggcgccgccggcaacccggtgaacccgcacggccaccgcacggcc
tacctgtgggagcaggtctggcagcgtgacagctggctggaaatcctgggccgctacctg
gtggcgcagcgcgatggcaggaagcaggtcaaggcggtgctgtttccccgctaccaccag
ctcgacgccacgcgccggctgctggccgccgtgcgggccgaaggcccgggcggcaagtac
ctgatccagcattcggccggctcgggcaagaccaattccatcgcctgggccgcgcacttc
ctggccgacctgcacgatccgcagcacaggaagctgttcgacaccgtgctggtggtgagc
gaccgcaatgtgctggacgcgcagctgcaggaggcgatcttcggcttcgagcgcactgcc
ggcgtggtggccacgatcaagggcgagggcggcagcaagagcggcgagctggccgaggcg
ctgtcgggcggcaagaagatcgtggtgtgcacgatccagacctttccggccatccacaag
aagatgagcgagctggcgtcgcaggaaggcaagcgctttgccgtcatcgcggacgaggcg
cacagctcgcaaaccggtgaagcggcgtccaagctcaaggaggtgctgggcgtcgacgag
caaagggacctggccgacgggggcggcgtgagcgccgaggacgtcgtgctggccgcccag
atggccgcccgggcgaatgccgccggcatcacctacatcgccttcacagccacgcccaag
gccaagacgctggagctgttcggccgccggccttcgcccgagcaccccgccgggccggac
aacctgcccgcgccgttccatgtgtattcgatgcggcaggccatcgaagagggtttcatc
ctcgacgtgctgcgcaactacacaccttacaagctggctttcaagctggcgaacgaaggc
agggagtgggacgagaaggaggtcgagcgcagcacggcgatgaagggcctgatgcgctgg
gtgcgcctgcatccgcacaacatcagccagaaggtggccgtggtggtggagcacttccgc
cagaacgtgcagccgctgctggacggccacgccaaggcgatggtggtgctgggcagccgg
gccgaggcggtgcgctggcagctcgcggtgaccaagtacattcaggacaacggctacccg
ctgcgcaccctggtggctttctcgggcgaggtgagcgtgcctgacctgctgcccgatgtc
gtgagcgaagccgccagtgcgctcaaccccaacctgaagggccgcggcatccgcgaggcc
ttcgccaccgacgaataccagttgctgctggttgccaacaagttccagaccggctttgac
cagcccctgctgtgcggcatgtacgtggacaagcggctggccggcatccaggcggtgcag
accctctcgcgcctgaaccgggcctacagcggcctgcatggcgtcaaggacgagacctac
gtgctggacttcgtgaacgagcccgacgaggtgctggcggcgttcaagacctactacgcc
acggccgagctggccggcgtgaccgacccgaacctggtgttcgacctgcgcgccaagctg
gatgcaaccggtcactacgacgagttcgaggtggaccgcgtcgcgcgggccgagctggac
cccaagggcacgcaggccgcgctggtggcagccatcgaaccggtagccgaccggctgctg
cggtggtacaaggcggcggccgaggtgctggccgcggctgaatcggccaccgccggcgtg
gacagccaggccgcgcagcaggccaaggacacggtgaatgcgctgatcctgttcaagcgc
gacctgggcaccttcggccgggtctatgccttcctgtcgcagatgtttgactacggcaac
accgccatcgagaagcgggcgatcttcttcaagcggctgctgccgctgctggagttcggg
cgtgaacgcgagggcatcgacctgtcgaaagtggtgctcacgcaccaccggctgaaagac
ctgggcgggcggcgactggcgctgtcagtgagcgaacctggcgccgactacaagttgcag
ccgctgggggaggccggcggcggggatgtgcaggacaagcagaaggcgttgctgtcggag
atcgtggagctggtaaacgagctgttcgacggtgaggtgacggatgacgacaagctggtg
tacgtcaatcacgtgatcaagggcaagctgctggagtccgacctgctggtgcggcaggcc
atgaacaacaccaagggccagttccacaactcgccggacctgggcagccaactgatcgag
gccatcatgggtgcgagctcggccaatgaatccatgaccgcgcaggcactggcgtccgag
cgggtccggcgggggctgctggacattttgatggggccggggcggctgtatgaggccttg
cgtgagcgccggtcgcccggtgagtga

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