Ramlibacter tataouinensis: Rta_21710
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Entry
Rta_21710 CDS
T01544
Name
(GenBank) hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase)-like protein
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00280
Valine, leucine and isoleucine degradation
rta00650
Butanoate metabolism
rta00907
Pinene, camphor and geraniol degradation
rta01100
Metabolic pathways
rta01120
Microbial metabolism in diverse environments
rta04146
Peroxisome
Module
rta_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rta_21710
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rta_21710
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rta_21710
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rta_21710
Enzymes [BR:
rta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Rta_21710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AEG93267
UniProt:
F5XZ97
LinkDB
All DBs
Position
complement(2296330..2297247)
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AA seq
305 aa
AA seq
DB search
MTIREVGLRDGLQIIPRTVPTAAKLAWIRDAHAAGLRELEVGSFVPARLMPQLADTAEVL
AHARTLPGLVASVLVPNLKGAERAIAEEAHAMLVPLSASHAHSLANLRKTPDDVVAEIAR
IRAARDAAGSHTVLEVGISTALGCTLQGEVPASEVVRLVQAVLDAGAERISIADTVGYAD
PAMVTRLFEQVLRVAGERFDTAHFHDTRGLGLANCYAALQLGIVRLDACLGGIGGCPHAP
GASGNVATEDLAYLLASMGIATGLDFDALLALRGRLAHWLEGEPLHGSLWRAGLPKTLRR
EEVAA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccgcgaggtcggcctgcgcgacgggctgcagatcatcccgcgcaccgtgccc
accgccgccaagctggcgtggatccgcgacgcccacgccgccggcctgcgcgagctggaa
gtcggctccttcgttccggctcggctgatgccgcagctggccgacaccgccgaagtgctg
gcccatgccagaacgctgcccggcctggtcgcctccgtcctcgtgcccaacctcaagggt
gccgagcgcgccatcgccgaagaggcgcacgccatgctggtgccgctgtcggccagccac
gcgcacagcctggccaacctgcgcaagacgcccgacgacgtggtggccgagatcgcccgc
atccgcgccgcgcgcgacgccgccggctcgcacaccgtgctggaggtgggcatcagcacc
gcgctgggctgcaccctgcagggcgaggtgccggcctcggaagtggtgcgcctggtgcag
gccgtgctggacgccggcgccgagcgcatcagcatcgccgacaccgtgggctacgccgac
ccggcgatggtgacgcgcctgttcgagcaggtgctgcgcgtggccggcgagcgcttcgat
accgcgcacttccacgacacgcgcggcctgggcctggccaactgctatgccgcgctgcag
ctgggcatcgtgcggctggacgcctgcctgggcggcatcggcggctgcccgcacgcgccc
ggcgccagcggcaacgtggccaccgaggacctggcctacctgctggccagcatgggcatc
gccaccggactggacttcgacgcgctgctggcgctgcgcggccggctggcccactggctg
gaaggcgagccgctgcacggatcgctgtggcgcgccggtctgcccaagaccctgcgccgc
gaggaggtggcggcatga
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