Ramlibacter tataouinensis: Rta_24370
Help
Entry
Rta_24370 CDS
T01544
Symbol
rumA
Name
(GenBank) Candidate 23S rRNA (Uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase)
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rta03009
]
Rta_24370 (rumA)
Enzymes [BR:
rta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rta_24370 (rumA)
Ribosome biogenesis [BR:
rta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rta_24370 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
MTS
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AEG93535
UniProt:
F5Y1V1
LinkDB
All DBs
Position
complement(2587435..2588868)
Genome browser
AA seq
477 aa
AA seq
DB search
MSAENDEVTARPAGLQEAWLEVDALDIEAQGVARRPDGKVVFIDGALPGEWVSANVHRRK
NNWEAATLTAVHKASSQRVTGRCPHFGLHEGACGGCKMQHLHVGAQVAIKQRVLEDNLWH
LGKVRAGTVLRPIEGPAWGYRWRARFSVRHVRKKGTVLVGFHERKSRYVADIRECHVVPQ
EVSDLLLPLRGLIGGMDAIETCPQVELACGVDAADPSAPVIALVLRHLEPLSAGDLARLR
SFGAAHPGVQWWLQPKGPDTVHLLDEGGPELAYTLPEFGIVMPFKPTDFTQVNPFINQVL
VSRALRLLQARRDERVIDWFCGLGNFTLPLATQAGEVLGIEGSEALVARSRTNYERNRAG
AGLAATRFATRNLFEMTPRQLVADGVAQRWLVDPPREGAFALAKALADLHQQPGEVPGWT
PPRRIVYVSCNPATLARDAGLLVHQAGYRCSAAGVVNMFPHTAHVESIAVFDKENAT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagagaacgacgaagtgacggcccgtcccgcggggctgcaggaagcctggctg
gaggtggacgccctggacatcgaggcccagggcgtggcccggcggccggacggcaaggtg
gttttcatcgacggcgcgctgcccggcgagtgggtcagcgccaacgtgcaccgcaggaag
aacaactgggaagccgccacgctgacggccgtgcacaaggcctcgtcgcagcgcgtgacc
ggccgctgcccgcacttcggcctgcacgagggcgcctgcggcggctgcaagatgcagcac
ctgcatgtgggcgcccaggtggccatcaagcagcgcgtgctggaggacaacctctggcac
ctgggcaaggtcagggccgggaccgtgctgcggcccatcgagggcccggcctggggctac
cgctggcgggcgcgcttctcggtgcgccacgtgcgcaagaagggcacggtgctggtgggc
ttccacgaacgcaagagccgctacgtggccgatatccgcgagtgccacgtggtgccccag
gaggtcagcgacctgctgctgccgctgcgcgggctgatcggcggcatggacgccatcgag
acctgcccgcaggtcgagctggcctgcggcgtcgacgcggcggatccgtcggcgccggtg
atcgccctggtgctgcggcacctggagccgctgagcgcgggcgacttggcccggctgcgc
tcgttcggggcggcccatccgggggtgcagtggtggctgcagcccaaggggccggacacg
gtccacctgctggacgagggcgggccggaactggcctacaccctgcccgagttcggcatc
gtcatgccgttcaagccgaccgatttcacccaggtcaatcccttcatcaaccaggtgctg
gtgtcgcgcgcgctgcgcctgctgcaggcccggcgcgacgagcgcgtgatcgactggttc
tgcgggctgggcaacttcaccctgccgctggccacgcaggccggcgaggtgctgggcatc
gagggcagcgaggccctggtggcgcgctcgcgcaccaactacgagcgcaaccgggccggc
gccggcttggccgccacccgcttcgcgacgcgcaacctgttcgagatgacgccccggcag
ctggtggccgacggcgtggcccagcgctggctggtggacccgccgcgcgagggcgccttt
gccctggccaaggcgctggccgacctgcaccagcagcccggcgaggtgccgggctggacg
ccgccgcggcgcatcgtctacgtcagctgcaaccccgccaccctggcgcgcgacgccggc
ctgctggtgcaccaggccggctaccgctgctcggcagcgggcgtggtcaacatgttcccg
cacacggcccacgtggagagcatcgcggtgttcgacaaggaaaacgcgacgtga
DBGET
integrated database retrieval system
