KEGG   Ramlibacter tataouinensis: Rta_25650
Entry
Rta_25650         CDS       T01544                                 
Symbol
parE
Name
(GenBank) Candidate DNA topoisomerase IV, subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rta  Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:rta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rta03032]
    Rta_25650 (parE)
   03036 Chromosome and associated proteins [BR:rta03036]
    Rta_25650 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rta02048]
    Rta_25650 (parE)
Enzymes [BR:rta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Rta_25650 (parE)
DNA replication proteins [BR:rta03032]
 Prokaryotic type
  DNA Topoisomerases
   Rta_25650 (parE)
Chromosome and associated proteins [BR:rta03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Rta_25650 (parE)
Prokaryotic defense system [BR:rta02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Rta_25650 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: AEG93663
UniProt: F5Y2W7
LinkDB
Position
complement(2735560..2737482)
AA seq 640 aa
MLKGLEPVKQRPGMYTRTDNPLHIVQEVLDNAADEALAGHGKRIKVTLHADGSVSVEDDG
RGIPFGLHPEEKAPVIELVFTRLHAGGKFDKGKGGAYSFSGGLHGVGVSVTNALAKRLEV
TSHREGQVATLVFSGGDVIERLRLRKAGEGDRRQGTTVRVWPDGKYFESSQLPMAELAHL
LRSKAVLMPGVTVSLVNEKAKETQTWQYKGGLRDYLMQTLTADPVIPLFEGEGFADSNET
FAEGEGAQWCVAFTEDGAPVRESYVNLIPTSAGGTHDSGLRDGLFNAVKSFIELHSLLPK
GVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLNSRDAVRLVSSFVRPALELWLNQHVD
YGRKLAELAIKAAQTRQKAGQKVEKRKGSGVAVLPGKLTDCESRDIGHNEVFLVEGDSAG
GSAKMGRDKECQAVLPLRGKVLNTWEVERDRLFANTEIHDIAVAIGVDPHGPNDTPDLSG
LRYGKVCILSDADVDGSHIQVLLLTLFFRHFPKLIDTGHVYVARPPLFRVDTPARGKKPA
GKQYALDEGELTAILDKLRKEGVKEGAWSISRFKGLGEMSAEQLWETTLNPDTRRLLPVQ
LGRFDFSGTESLITKLMGKGEAAARRELMELHGDAVEIDI
NT seq 1923 nt   +upstreamnt  +downstreamnt
gtgctcaagggcctggagcccgtcaagcagcggccgggcatgtacacgcgcaccgacaac
cccctgcacatcgtgcaggaggtgctggacaacgccgccgacgaggccctggccgggcac
ggcaagcgcatcaaggtcacgctgcatgccgacggctcggtcagcgtcgaggacgacggc
cggggcatcccgttcggcctgcaccccgaggagaaggcgccggtcatcgagctggtgttc
acccggctgcacgccggcggcaagttcgacaagggcaagggcggcgcctacagcttctcc
ggcggcctgcacggcgtgggcgtgtcggtgaccaacgccctggccaagcggctggaggtg
accagccaccgggagggccaggtcgcgacgctggtgttctcgggcggcgacgtgatcgag
cggctcaggctgcgcaaggccggcgagggcgaccggcgccagggcaccacggtgcgcgtc
tggcccgacggcaagtacttcgaatcctcccagctgccgatggccgagctggcccacctg
ctgcgcagcaaggccgtgctgatgcccggcgtcaccgtgtccctggtcaacgagaaggcc
aaggaaacccagacctggcagtacaagggcggtctgcgcgactacctgatgcagacgctg
acggccgacccggtgatcccgctgttcgagggcgagggcttcgccgacagcaacgagacc
ttcgccgagggcgagggcgcccagtggtgcgtggccttcaccgaggacggcgcgccggtg
cgcgagagctacgtcaacctcatcccgaccagcgccggcggcacgcacgacagcggcctg
cgcgacgggctgttcaacgccgtcaagagcttcatcgagctgcattcgctgctgcccaag
ggcgtcaagctgctgcccgaggacgtgttcgcccgggcttcctacgtgctcagcgccaag
gtgctggacccgcagttccagggccagatcaaggaaaggctgaattcgcgcgacgcggtg
cggctggtgtccagcttcgtgcgcccggcgctggagctgtggctcaaccagcacgtggac
tacggcaggaagctggccgaactggcgatcaaggcggcgcagacgcgccagaaggccggc
cagaaggtcgagaagcgcaagggctcgggcgtggccgtgctgccgggcaagctcacggac
tgcgaaagccgcgacatcggccacaacgaggtgttcctggtcgagggcgactcggctggc
ggcagcgccaagatgggccgcgacaaggagtgccaggccgtgctgccgctgcgcggcaag
gtgctcaacacctgggaggtggagcgcgaccgcctgttcgccaacaccgagatccacgac
atcgccgtggccatcggcgtggacccgcacggccccaacgacacgcccgacctgtcgggc
ctgcgctacggcaaggtctgcatcctgtccgatgccgacgtggacggctcgcacatccag
gtgctgctgctgacgctgttcttccgccacttccccaagctgatcgacaccggccacgtg
tacgtggcgcggccgccgctgttccgggtggacacgccggcgcgcggcaagaagccggcc
ggcaagcagtacgcgctggacgagggcgagctcaccgccatcctggacaagctgcgcaag
gagggcgtcaaggaaggcgcctggagcatcagccgcttcaagggcctgggcgagatgagc
gccgagcagctgtgggagaccacgctcaaccccgacacccggcgcttgctgccggtgcag
ctgggcaggttcgacttctccggcaccgagagcctgatcaccaagctcatgggcaagggc
gaggccgccgcgcgccgcgagctgatggagctgcacggcgacgcggtagaaatcgacatc
tag

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