Ramlibacter tataouinensis: Rta_27160
Help
Entry
Rta_27160 CDS
T01544
Symbol
dbpA
Name
(GenBank) Candidate ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rta03009
]
Rta_27160 (dbpA)
Enzymes [BR:
rta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Rta_27160 (dbpA)
Ribosome biogenesis [BR:
rta03009
]
Prokaryotic type
rRNA helicases
Rta_27160 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AEG93818
UniProt:
F5Y4H1
LinkDB
All DBs
Position
2888934..2890328
Genome browser
AA seq
464 aa
AA seq
DB search
MPATAFSTLPLSPATLANLDRLGYREMTAIQAASLPPALLGKDLIAQAKTGSGKTAAFAL
ALLANLNPRRFAVQSLVLCPTRELADQVTAEVRRLARAEDNTKVVTLTGGVPLRGQLTTL
EHGAHVVVGTPGRVLDHLERGSLRLDALNTLVLDEADRMLDMGFLDDIAKVVKQCPPQRQ
TLLFSATYPEGIARLAARFMREPVTVKVAAQHTGGVIEQRWYEVTERERIPAVSLLLGHF
RPASTLAFCNTKARCREVAAALQAQGTSALALSGELEQRERDQVLVRFANRSCSVLVATD
VAARGLDIAGLAAVINVDVTPDPEVHIHRIGRTGRAGESGLALSLASLDEMGAVGRIEQL
QGRESVWHPLGGLTPGGTGPLVPPMATLHIQGGRKEKIRPGDVLGALTADLGYTREQVGK
IDVNEFSTYVAVERGIAGQAASRLNAGRIKGRSVKVRVLQEAEG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgccttcagcaccctgcccctctcgccggccaccctcgccaacctcgac
cgcctgggctaccgggagatgacggccatccaggcggccagcctgccgccggccttgctg
ggcaaggacctgatcgcccaggccaagaccggcagcggcaagacggccgccttcgcgctg
gccctgctggccaacctcaacccgaggcgcttcgccgtgcagtcgctggtgctgtgcccc
acgcgcgagctggccgaccaggtgacggccgaggtgcggcggctggcgcgggccgaggac
aacaccaaggtggtcacgctcaccggcggcgtgccgctgcgcgggcagctcaccacgctg
gagcacggcgcacacgtcgtggtgggcacgcccggccgggtgctggaccacctggagcgc
ggcagcctgcggctcgatgcgctcaacaccctggtgctggacgaggccgaccgcatgctg
gacatgggcttcctggacgacatcgccaaggtcgtgaagcagtgcccgccgcagcgccag
accctgctgttctcggccacctaccccgagggcatcgcccggctggccgcccggttcatg
cgtgagccggtcacggtgaaggtggcggcgcagcacacgggcggcgtcatcgagcagcgc
tggtacgaggtgaccgagcgcgagcgcatccccgccgtgagcctgctgctgggtcatttc
cgccccgccagcacgctggccttctgcaacaccaaggcgcgctgccgcgaggtggcggcg
gcgctgcaggcgcagggcacgagcgcgctggccctgtccggcgagctggagcagcgcgag
cgcgaccaggtgctggtgcgcttcgccaaccgcagctgctcggtgctggtggccaccgac
gtggccgcgcgcgggctggacatcgcggggctggccgccgtgatcaacgtcgacgtgacg
cccgatcccgaggtgcacatccaccgcatcggccgcaccggccgcgccggcgaaagcggc
ctggccctcagcctggccagcctcgacgagatgggcgcggtgggtcgcatcgagcagctg
cagggccgggagagcgtgtggcatccgctgggcgggctcacgcccggcggcaccgggccg
ctggtgccgcccatggccacgctgcacatccagggcggccgcaaggagaagatccggccc
ggcgacgtgctgggcgcgctcacggccgacctgggctacacccgcgagcaggtcggcaag
atcgacgtgaacgagttctccacctacgtggcggtggagcgcggcatcgccgggcaggcg
gcgagccggctgaacgccggccgcatcaagggccgcagcgtcaaggtgcgggtgctgcag
gaggccgagggctga
DBGET
integrated database retrieval system
