Ramlibacter tataouinensis: Rta_27740
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Entry
Rta_27740 CDS
T01544
Name
(GenBank) candidate ABC type bacteriocin/lantibiotic exporters, ATP-binding and permease domains
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rta
Ramlibacter tataouinensis
Pathway
rta02010
ABC transporters
rta03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rta_27740
03070 Bacterial secretion system
Rta_27740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rta02000
]
Rta_27740
02044 Secretion system [BR:
rta02044
]
Rta_27740
Transporters [BR:
rta02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rta_27740
Secretion system [BR:
rta02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Rta_27740
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
DEAD
AAA_29
AAA_16
AAA_18
RsgA_GTPase
nSTAND3
ABC_ATPase
AAA_14
Cytidylate_kin
AAA_28
DUF87
AAA_33
AAA_24
PRK
Motif
Other DBs
NCBI-ProteinID:
AEG93877
UniProt:
F5Y537
LinkDB
All DBs
Position
complement(2954427..2956316)
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AA seq
629 aa
AA seq
DB search
MALMVSGEFVLVLKAGTEGVQLWNGGGEQKTWAEGEFGEFFAEYIVQAAPAVRAPADTDA
ASMRQGFGFRWFVPELLKHKAVWRQVLVASLFLQLLSLAFPLITQAVVDKVVVHRTQSTL
VVLGIAMGIFVFFTAILGWIRQYLVLHTGNRVDAVLGASVFEHLFKLPLRYFEKRPTGVI
AARMNGIETIREFISSAAVTLVLDVPFLLIALAVMFFYSVPLTLIVLGILGVIGLMSILV
APVFQRRMNEQFMLGARNQAFLTEHVAGHETVKSLQMEPLLNARYGGYLAAYLQSGFATR
QIGNTYNTVASALEQLMTVLVLMAGAWIVMNPTPGGTAFTIGMLVAFQMFAGRISQPMLR
LVGLWQQFQQASLAVQRLGDLMNAPVEPYSLLPARQGDATGKIELEGVGFRYGDELPWLY
RNVHLQIEPGRAIAIMGPSGSGKSTLAKLLQGFYRATEGAVKVNGIDARHQSANELRSNF
GVVPQETVLFSGSIYDNLLAANPQASIQDVVQACRRAEIHQTIESLPNGYQTEIGERGAG
LSGGQKQRIAIARALLKNPKVLIFDEATSSLDVGTAESFAATVNQLKGHVTMIFVTHAMP
RTLQVDEVYIVRDGALRKAIARVKEEAKA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctcatggtttcgggcgagttcgtgctggtgctgaaggccggcacggaaggcgtg
cagctgtggaatggcggtggggagcagaaaacctgggccgagggggagttcggcgagttc
ttcgccgagtacatcgtccaggccgcgccggcggtgcgtgctcctgccgacaccgacgcg
gcctccatgcgccagggcttcggtttccgctggttcgtgcctgagctcctcaagcacaaa
gcggtatggcggcaggtgctcgtcgcgtccctgtttctccaactgctgtcgctcgccttc
cccctgatcacccaggccgtcgtcgacaaagttgtcgtccatcgcacccaaagcaccctg
gtggtactgggaatcgccatgggcatctttgtctttttcaccgcaattctggggtggata
cggcaatacctcgtcctccacaccggcaaccgtgtcgatgcggtgctcggtgccagcgtc
ttcgagcacctgttcaaactgccgttgcgctatttcgagaagcggccaaccggagtcatc
gcagcccgcatgaatggcatcgagacgattcgcgagttcatttcctcggcggcggtcacg
cttgtgctggatgtcccgttcctgctgatcgccctggccgtgatgttcttctactcagta
ccgttgacgttgatcgtgctgggcatcctgggcgtgatcggactgatgtccatcctggtg
gcgccggtgttccagcggcggatgaacgagcagttcatgctgggcgcgcgcaaccaggcg
ttcctcacggagcacgtggcaggccatgaaaccgtgaaaagccttcagatggagccgctg
ctcaatgcccgctacggtggctacctggctgcttacctgcaatccggattcgcaacgcgc
cagatcggcaacacgtacaacacggtcgccagcgccctcgagcagctgatgaccgtgctg
gtgctgatggccggcgcctggatcgtgatgaacccgacccccggcggcacggcgttcacc
atcggcatgctcgtggccttccagatgtttgccggccgcatcagccagccgatgctgcgg
ctggtcggtttgtggcagcagtttcagcaggcgagcctggccgtacaaaggttgggtgac
ctgatgaacgcaccggtcgaaccttacagcctcctgcccgcacggcaaggcgacgccacg
gggaaaatcgagctcgagggcgtaggttttcgctacggcgacgagctgccctggctttat
cgcaacgtgcacctgcagatagagccgggccgcgccatcgccatcatggggccgagcggc
tccggcaaatcaacgctggccaagctgctgcagggcttctaccgcgcaacggaaggtgcg
gtaaaggtcaacggcatcgacgctcgccatcaatcggccaatgagcttcgcagcaacttc
ggcgtggtcccgcaggaaacggtgctgttcagcgggtcgatctatgacaacctgctggcc
gcgaatccgcaagccagcatccaggacgtcgtccaggcgtgccgccgtgcggagatccac
cagaccatcgagtcattgcccaacggctaccagacggagatcggcgagcgcggcgcaggc
ctgtccggtggccagaagcagcgtatcgccatcgcgcgcgcgctgttgaagaaccccaag
gtgctgatcttcgacgaggcgacttcgtcgttggacgtgggcacggcggaatcctttgcg
gccaccgtgaaccagctgaaggggcacgtcaccatgatcttcgtcacccatgccatgccg
cgtactttgcaggtggacgaggtctacatcgtgcgggacggcgcgctgcgcaaggcgatc
gcccgggtgaaggaggaggccaaggcatga
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