Ramlibacter tataouinensis: Rta_27780
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Entry
Rta_27780 CDS
T01544
Symbol
pcnB
Name
(GenBank) Candidate polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rta_27780 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rta03019
]
Rta_27780 (pcnB)
Enzymes [BR:
rta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Rta_27780 (pcnB)
Messenger RNA biogenesis [BR:
rta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Rta_27780 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Slu7
Motif
Other DBs
NCBI-ProteinID:
AEG93881
UniProt:
F5Y541
LinkDB
All DBs
Position
complement(2958798..2960381)
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AA seq
527 aa
AA seq
DB search
MIKKFIDALIGATTGGGKKPRFGKRQEVGPQEHGIDVSLVDDRAVNVVHTLQEAGYQAYI
VGGAVRDLLLGLRPKDFDVATDATPEQVKGLFRRAFIIGRRFRIVHVVYGRGREHEVIEV
STFRAHMDNQAAEAVAGNEKTSRGELAGMKHAVDASGRVLRDNVWGPQEEDATRRDFTIN
AMYYDPQTQTLVDYHGGIQDARKKTLRMIGDAAARYREDPVRIIRAVRFAAKLHPLGFKL
EAKTLAALAPSLPLLAEVPQSRLFDEMLKLLQTGHALATIVQLKALGLARGIYPLLDLVV
ERAEQPFVRSALQDTDRRVAEGKPVAPSFLLACVLWSDVRDGWAQRLARKEHPFPALQGA
IDDVFDARIGDVSGRGKLAADMREIWMMQPRFDKRVGSTPYSLVEQPRFRAGFDFMRLRA
EVGEVDVVLADWWQEFSQAGDALREDLMAQVREEQQKGQRRVRVPRPAVDRPPVDVAGAA
QDAGSAPPAEAADDAGPADAPRKRRRRRRKPSGGADAPAGEAGGGEA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaattcatcgacgccctgataggcgccaccaccggcggcggcaagaaaccc
aggttcggcaagcgccaggaagtcggcccccaggaacacggcatcgacgtctcgctggtg
gacgaccgggcggtgaacgtggtgcacacgctccaggaggccggttaccaggcctacatc
gtgggcggcgcggtgcgcgacctgctgctggggctgcggcccaaggacttcgacgtggcc
accgacgccacgcccgagcaggtcaagggcctgttccgccgcgccttcatcatcggccgg
cgcttccgcatcgtgcacgtggtgtacggccgcggccgcgagcacgaggtgatcgaggtc
tccaccttccgcgcccacatggacaaccaggccgccgaggccgtggccggcaacgagaag
accagccgcggcgagctggccggcatgaagcacgcggtggacgccagcggccgcgtgctg
cgcgacaacgtgtgggggccgcaggaggaggacgcgacgcggcgcgacttcaccatcaac
gccatgtactacgacccgcagacgcagacgctggtcgactaccacggcggcatccaggac
gccaggaagaagacgctgcgcatgatcggcgacgccgccgcgcgctaccgcgaggacccg
gtgcgcatcatccgcgccgtgcgcttcgccgccaagctgcacccgctgggcttcaagctc
gaggccaagaccctggcggcgctcgcgcccagcctgccgctgctggccgaggtgccgcag
agccgcctgttcgacgagatgctcaagctgctgcagaccggccatgcgctggccaccatc
gtgcagctcaaggcgctggggctggcgcggggcatctacccgctgctggacttggtggtc
gagcgcgccgagcagccgttcgtgcgctcggccctgcaggacacggaccgccgcgtggcc
gagggcaagccggtggcgcccagcttcctgctggcctgcgtgctgtggtccgacgtgcgc
gacggctgggcgcagcgactggcgcgcaaggagcatccgttcccggcgctgcagggcgcc
atcgacgacgtcttcgacgcccgcatcggcgacgtctccggccgcggcaagctggcggcc
gacatgcgcgagatctggatgatgcagccgcgcttcgacaagcgcgtgggcagcacgccc
tacagcctggtggagcagccgcgcttccgggccggtttcgacttcatgcgcctgcgcgcc
gaggtcggcgaggtggacgtggtgctggccgactggtggcaggagttcagccaggccggc
gacgcgctgcgcgaggacctgatggcccaggtgcgggaagagcagcagaagggccagcgc
cgggtgcgggtgccgcgcccggcggtcgaccggccgccggtggacgtggcgggcgcggcg
caggatgccggctccgcgccgccggccgaggcggcggacgatgccgggccggccgacgcg
ccgcgcaagcgccgccggcgccgccgcaagccgtcgggaggtgccgacgctccggcgggc
gaggccggcggcggcgaggcctga
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