Ramlibacter tataouinensis: Rta_29140
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Entry
Rta_29140 CDS
T01544
Symbol
pilB
Name
(GenBank) candidate type 4 fimbrial assembly protein pilB, putative traffic ATPase
KO
K02652
type IV pilus assembly protein PilB
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rta02044
]
Rta_29140 (pilB)
02035 Bacterial motility proteins [BR:
rta02035
]
Rta_29140 (pilB)
Secretion system [BR:
rta02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Rta_29140 (pilB)
Bacterial motility proteins [BR:
rta02035
]
Pilus system
Pilus assembly proteins
Rta_29140 (pilB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
DEAD
ATPase
AAA_7
HerA_C
nSTAND3
AAA_19
AAA_30
RibD_C
AAA_29
ApoLp-III
AAA_14
MetOD2
Motif
Other DBs
NCBI-ProteinID:
AEG94017
UniProt:
F5Y6E3
LinkDB
All DBs
Position
3102299..3104044
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AA seq
581 aa
AA seq
DB search
MPMAAVDPVAPEAASVALPGIARALVSARKLSQKSAEDLWRKAQANRSSFTAELTGSGAV
SPFDLAHTMSAAFGAPMLDLDAIDIKRLPRNLLDSKTCQAFRVVVLSKRNNRLIVATADP
SDQQAAEKIKFATQMGVDWVIAEYDKLTKMVEANATTASETMESIVGDDFDFDESSMESS
AADDEEKAGAAEVEDAPVVKFLHKMLLDAFTMRASDLHFEPYEHNYRVRFRVDGELREIS
SPPVAIKDKLASRIKVISRMDISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVI
RILDPSSARLGIEALGYEPQEKERLLEAVQRPYGMVLVTGPTGSGKTVSLYTCLNLLNKP
GVNISTAEDPSEINMPGVNQVNVNEKAGLTFAAALKSFLRQDPDVIMVGEIRDLETADIA
IKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCASCKAPA
DIPHETLLDAGYKEEEVDGTWTPYRPVGCSACNNGYKGRVGIYQVMPISEEIQRIILRDG
SSLEIAQQAESEGVRSLRQSGLHKVKLGVTSLEEVLGCTNA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
ttgcccatggccgccgtcgatcccgtcgcccccgaagccgcttccgtggccctgcccggc
atcgcacgtgcgctggtctcggcccgcaagctcagccagaaatcggccgaggacctgtgg
cgcaaggcgcaggccaaccgcagcagcttcaccgccgagctcaccggctccggcgctgtc
tcccccttcgacctggcccacaccatgtcggcggctttcggcgcgccgatgctggacctg
gacgccatcgacatcaagcgcctgccccgcaacctgctggacagcaagacctgccaggcc
ttccgggtggtggtgctgagcaagcgcaacaaccggctcatcgtcgccaccgccgacccg
tcggaccagcaggcggccgagaagatcaagttcgccacgcagatgggcgtggactgggtc
atcgccgagtacgacaagctcaccaagatggtggaggccaacgccaccaccgccagcgaa
acgatggagagcatcgtcggtgacgacttcgacttcgacgaatcgtcgatggaaagcagc
gccgccgacgacgaggagaaggcgggcgccgccgaggtcgaggacgccccggtcgtcaag
ttcctgcacaagatgctgctagacgcgttcaccatgcgggcctcggacctgcacttcgag
ccgtacgagcacaactaccgcgtgcgcttccgggtagacggcgagctgcgcgagatttcc
tcgcccccggtggccatcaaggacaagctggcctcgcgcatcaaggtcatctcgcgcatg
gacatctccgagaagcgggtgccgcaggacgggcggatgaagctcaaggtcggacccgac
cgggtgatcgacttccgcgtcagcacgctgcccacgctgttcggcgagaagatcgtgatc
cgtatcctggacccgagcagcgccaggctgggcatcgaggcgctgggctacgagcctcag
gagaaggagcggctgctcgaggccgtgcagcgcccgtacggcatggtgctggtcaccggc
cccaccggctcgggcaagacggtgtcgctctacacctgcctgaacctgctgaacaagccc
ggcgtcaacatctccacggccgaggacccgtccgaaatcaacatgccgggcgtgaaccag
gtaaacgtcaacgagaaggcgggcctgaccttcgccgccgcgctcaagtccttcctgcgc
caggaccccgacgtcatcatggtgggcgagatccgcgacctggagacggccgacatcgcc
atcaaggcggcgcagaccggccacctggtgctgtccacgctgcacaccaacgacgcgccc
accacgctcacgcggatgcgcaacatgggcatcgcgccgttcaacatcgcctccagcgtc
atcctgatcacggcgcagcgcctggcgcgccgcctctgtgccagctgcaaggcgccggcg
gacatcccgcacgagaccctgctggacgccggctacaaggaagaggaagtcgacggcacc
tggacgccctaccgcccggtgggctgctcggcgtgcaacaacggctacaaggggcgggtc
ggcatctaccaggtgatgcccatcagcgaagagatccagcgcatcatcctgcgcgacggc
agctcgctcgagatcgcgcagcaggccgagagcgaaggcgtccggagcctgcgccagtcc
gggctgcacaaggtcaagctgggcgtcacctcgctggaagaagtgctcggctgcaccaac
gcataa
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