Ramlibacter tataouinensis: Rta_30590
Help
Entry
Rta_30590 CDS
T01544
Name
(GenBank) formate dehydrogenase (Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide)-like protein
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00630
Glyoxylate and dicarboxylate metabolism
rta00680
Methane metabolism
rta01100
Metabolic pathways
rta01120
Microbial metabolism in diverse environments
rta01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rta_30590
09102 Energy metabolism
00680 Methane metabolism
Rta_30590
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Rta_30590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4_7
Fer4_Nqo3
Fer4_21
Fer4_6
Fer4_9
Fer4
Fer4_8
Fer4_10
Fer4_2
Fer4_22
Fer4_17
Fer4_16
Fer4_4
SBP_bac_11
Fer4_18
SymE_toxin
GDC-P
Motif
Other DBs
NCBI-ProteinID:
AEG94169
UniProt:
F5XWM5
LinkDB
All DBs
Position
complement(3266412..3269246)
Genome browser
AA seq
944 aa
AA seq
DB search
MKSPDLPLVSFKLDGAEVQALQGETILQAARRVGVEIPHLCWADGLRPDGNCRACVVEVA
GERVLAPSCCRAVAPGLEVQARSERALKSQKMVLELLLADLPERGHKWNDEAGAQPHGEL
SEWAARLRVAPRPALKALRRSQPAPDLSHPAMAVNLDACIQCTRCVRACREEQVNDVIGY
AGRGAASRIVFDLGDAMGESTCVACGECVQACPTGALMPKTLVGSQQVDQEVPSVCPFCG
VGCQITYKVRDNRIVGVDGRDGPANHGRLCVKGRFGFDYAHHPQRLTKPLIRRPGVSKDP
NSLLLPGRARVGAGAGQEGAPAIGDVFREATWEEALDFAAGRLKALRGTHGPKSLAGFGS
AKGTNEEAYLFQKLVRTGFGSNNVDHCTRLCHASSVAALLEGVGSGAVSNPVADVAQAEL
VIVIGSNPTANHPVAATWMKNAARQGTRIVLADPRITELGRHAWRTLQFKPDTDVALLNA
MIHTLIEEGLADREFIAQRASNFEALKESVAGFAPEAMEAVCGVPAGRIREVARAFASAK
SAMILWGMGVSQHVHGTDNARCLIALCTVAGQIGKPGSGLHPLRGQNNVQGASDAGLIPM
MFPNYQRVGSPEAHAWFQDFWGARLDPQPGYTVVEILHQALAPDTDPHKVRGMYVMGENP
AMSDPDLNHAREALAALEHLVVQDIFMTETAWLADVVLPATAWPEKTGTVTNTDRMVQLG
RQAIDAPGDAKPDLWLIQQIAGRMGLNWHYEGGHAGVAAVYEEMRQAMHGAIAGISWQRL
EREGSVTYPCLSEDDPGQPIVFTERFPTPDGRVRLVPAQLVAADERPDGEFPLVLITGRQ
LEHWHTGSMTRRSAVLDAIEPVATASVNGRELERLGLAAGQPVRLQSRRGELTCHLRRDD
GTPDGAVFMPFAYSEAAANLLTNAALDPFGKIPEFKYCAVRISA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgcctgatctccccttggtgagcttcaagctcgacggcgccgaggtccaggcg
ctgcagggcgagaccatcctgcaggcggcgcgccgcgtcggcgtggagatcccgcacctg
tgctgggccgatggcctgcggcccgacggcaactgccgcgcctgcgtggtcgaggtcgcg
ggcgaacgcgtgctcgcgcccagctgctgccgcgcggtggcgccgggcctggaggtgcag
gcccgcagcgaacgcgcgctcaagagccagaagatggtgctggagctgctgctggcggat
ctgccggagcgggggcacaagtggaacgacgaggccggcgcgcagccgcatggcgagctg
agcgaatgggcggctcgcctgcgggtggcgccgcgcccggccctgaaggccttgcggcgc
tcccagcccgcgccggacctctcgcaccctgccatggccgtcaacctcgatgcctgcatc
cagtgcacccgctgcgtgcgcgcctgccgcgaggagcaggtcaacgacgtgatcggctat
gccggccgcggcgccgccagccgcatcgtgttcgacctgggcgacgccatgggcgagagc
acctgcgtggcctgcggcgaatgcgtgcaggcgtgcccgaccggcgcgctgatgcccaaa
accctggtcggctcgcagcaggtggaccaggaggtgccctcggtctgcccgttctgcggc
gtcggctgccagatcacctacaaggtgcgcgacaaccgcatcgtcggcgtcgacggccgc
gacggcccggccaaccacgggcggctgtgcgtcaagggccgcttcggcttcgactacgcc
caccatccgcagcggctcacgaagccgctgatccgcaggcccggcgtatccaaggatccc
aactccctcctcctcccggggagggcgagggtgggggcaggcgcgggccaggagggagca
cccgccatcggcgacgtcttccgcgaagccacctgggaggaagcgctggacttcgcggcc
ggccggctgaaagccttgcgcggcacccatgggcccaagtcgctggccggcttcggctcg
gccaagggcaccaacgaggaggcctacctgttccagaagctggtgcgcaccggtttcggc
agcaacaacgtggaccactgcacccgcttgtgccatgcctccagcgtggcggcgctgctg
gagggcgtgggctcgggggcggtcagcaacccggtggccgacgtggcccaggccgagctg
gtcatcgtgatcggctccaaccccacggccaaccacccggtggccgccacctggatgaag
aacgcggccaggcagggcacgaggatcgtgctggccgacccgcgcatcaccgagctcggc
cggcatgcctggcgcacgctgcaattcaagcccgacaccgacgtggccctgctcaacgcg
atgatccacaccctcatcgaggagggtctggccgaccgcgaattcatcgcgcagcgcgcc
agcaatttcgaagccctgaaggaatcggtggccggcttcgccccggaggccatggaagcg
gtgtgcggcgtgcccgccgggcgcatccgcgaggtggcgcgtgccttcgccagcgcgaaa
tccgccatgatcctgtggggcatgggcgtgagccagcacgtgcacggcaccgacaacgcg
cgctgcctgatcgcgctgtgcaccgtggccggccagatcggcaagcccggcagcggcctg
catccgctgcgcggccagaacaacgtgcagggcgccagcgacgccggcctgatccccatg
atgttcccgaactaccagcgcgtgggcagccccgaggcgcatgcctggttccaggacttc
tggggcgcccgcctggacccgcagcccggctacacggtggtggagatcctgcaccaggcg
ctggcgcccgacaccgacccgcacaaggtgcgcggcatgtatgtgatgggcgagaacccg
gccatgagcgaccccgacctgaaccacgcgcgcgaggcgctggcggcgctggagcacctg
gtggtgcaggacatcttcatgaccgagaccgcctggctggccgacgtggtgctgcccgcc
accgcctggccggagaagaccggcacggtcaccaacaccgaccgcatggtgcagctgggc
cggcaggcgatcgatgcgcccggcgatgcgaagcccgacctgtggctgatccagcagatc
gccggaagaatgggattgaattggcactacgaaggcgggcacgccggcgtggccgccgtc
tacgaggagatgcgccaggccatgcacggcgccatcgccggcatcagctggcagcggctg
gagcgcgagggcagcgtgacctacccctgcctgtccgaggacgacccgggccagcccatc
gtcttcaccgagcgcttccccacgccggacggccgggtgcggctggtgccggcgcagctg
gttgcggccgacgagcggccggatggcgagttcccgctggtgctgatcaccggccgccag
ctggagcactggcacaccggcagcatgacgcgccgctcggcggtgctggatgcgatcgag
cccgtcgccaccgcctcggtcaacggccgcgaactggagcgcctgggcctggcggccggc
cagccggtgcggctgcagtcgcgccgtggcgagctcacctgtcatctgcggcgcgacgac
ggcacgcccgacggtgctgtgttcatgcccttcgcctactcggaagcggcggccaacctg
ctgaccaacgccgcgctggacccgttcggcaagatccccgagttcaagtactgcgccgtg
aggatctccgcatga
DBGET
integrated database retrieval system
