Ramlibacter tataouinensis: Rta_34510
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Entry
Rta_34510 CDS
T01544
Name
(GenBank) candidate response regulator, NtrC
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rta
Ramlibacter tataouinensis
Pathway
rta02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rta_34510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rta02022
]
Rta_34510
02035 Bacterial motility proteins [BR:
rta02035
]
Rta_34510
Two-component system [BR:
rta02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Rta_34510
Bacterial motility proteins [BR:
rta02035
]
Pilus system
Twitching motility proteins
Rta_34510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA
AAA_16
PDE8A_N
HTH_23
HTH_28
Transketolase_C
HTH_30
AAA_3
HTH_50
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AEG94564
UniProt:
F5Y015
LinkDB
All DBs
Position
3673117..3674550
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AA seq
477 aa
AA seq
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MDDEPDLRTLYELTLLREGYRVDSAGTLAEAADLLQAKRFDAVITDMRLPDGLGLELLQR
LVAEQRPERCVVMTAYGSAENAVEALKAGAFDYLTKPVDLKQFRSVVASAIRESEALPLR
TQAAPRPAAGEAAPAGAQHALQRLVGGSPAMQQVKDRIAKVARSMAPVLVRGESGTGKEL
VARAIHACSHRAEGPFVAVNCGAIPESLLEAEFFGARKGSYTGATADREGYFQAARGGTL
FLDEIGDLPLAMQSKLLRAIQERQVRSLGSTQEDAVDVRIVSATHKDLAAEVQSGRFRQD
LYYRLNVIEILVPPLRERREDLPALCQALLARIAQETGMAVPVLSGVVLQQLASHPLQGN
VRELENLLHRAVALSDGNELQVDATPTPAAAAQEPAAATAAAAPAAAVVADEPMPSDLQA
YLDQQEREILVKALHESGFNRTAAAQRLGLSLRQIRYRIARLAIAAPGDDAPDHPAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgaacccgacctgcgcaccctgtacgagctgaccctgctgcgcgagggctac
cgcgtggactccgccggcacgctggccgaggcggccgacctgctgcaggccaagcgcttc
gatgccgtgatcaccgacatgcggctgcccgacggcctgggactggagctgctgcagcgt
ctggtggccgagcagcgccccgagcgctgcgtggtcatgacggcctatggttcggccgag
aacgcggtggaggcgctcaaggccggcgccttcgactacctcaccaagccggtggacctc
aagcagttccgcagcgtggtggcttccgccatccgcgagagcgaggcgctgcccctgcgg
acgcaggccgcgccccggccggccgcgggcgaggccgcgcccgccggcgcccagcacgcg
ctgcagcggctggtgggcggctcgccagccatgcagcaggtcaaggaccgcatcgccaag
gtggcccgcagcatggcgccggtgctggtgcgcggcgaatcgggaaccggcaaggagctg
gtggcgcgcgccatccacgcctgcagccaccgcgccgaggggccgttcgtggcggtgaac
tgcggcgccatccccgagtcgctgctggaagccgagttcttcggcgcgcgcaagggctcc
tacaccggcgccacggccgaccgcgagggctatttccaggcggcgcgggggggcaccctg
ttcctggacgagatcggcgatctgccgctggccatgcagtccaagctgctgcgcgccatc
caggagcgccaggtgcgctcgctgggctccacccaggaggacgcggtcgacgtgcgcatc
gtcagcgccacgcacaaggacctggcggccgaggtccagtcgggccgcttccggcaggac
ctgtactaccgcctcaacgtgatcgagattctggtgccgccgctgcgcgagcgccgcgag
gacctgccggcgctgtgccaggccctgctggcccgcatcgcgcaggagaccggcatggcc
gtgccggtgctgtccggcgtggtcctgcagcagctggcttcccatcccctgcagggcaac
gtgcgcgagctggagaacctgctgcaccgtgccgtggcgctgtccgacggcaacgagctg
caggtcgacgccacgccgaccccggccgcggccgcgcaggaacccgcggcagcgaccgcg
gctgctgcccccgcggcagccgtcgtcgcggacgagcccatgccgtcggacttgcaggcc
tacctggaccagcaggagcgagagatcctggtcaaggcgctgcacgagagcggcttcaac
cgcacggccgcggcccagcggctgggcctgagcctgcggcagatccgctaccgcatcgcg
cggctggcgatcgccgcgccgggcgacgatgcacccgaccaccccgccgcctga
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