Ramlibacter tataouinensis: Rta_34930
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Entry
Rta_34930 CDS
T01544
Name
(GenBank) long-chain-fatty-acid--CoA ligase-like protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00061
Fatty acid biosynthesis
rta00071
Fatty acid degradation
rta01100
Metabolic pathways
rta01212
Fatty acid metabolism
rta02024
Quorum sensing
rta04146
Peroxisome
Module
rta_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rta_34930
00071 Fatty acid degradation
Rta_34930
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rta_34930
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rta_34930
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rta01004
]
Rta_34930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rta04147
]
Rta_34930
Enzymes [BR:
rta01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rta_34930
Lipid biosynthesis proteins [BR:
rta01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rta_34930
Exosome [BR:
rta04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rta_34930
Exosomal proteins of breast cancer cells
Rta_34930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2464
Motif
Other DBs
NCBI-ProteinID:
AEG94606
UniProt:
F5Y057
LinkDB
All DBs
Position
3721351..3723297
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AA seq
648 aa
AA seq
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METSFPRLLLEHAARRPHAAAMREKEYGIWQAHSWSQLAQLVERLACGLHQAGLARGEHM
VVVGANRPRLYATLLAAQSLGAIPVPLYQDAAAAECVFPINNAEVRFAFAEDQEQVDKLL
EIRPQCPRLQAIWFDDPRGLRNYGEPGLASLDSLAEAGAAFAQAHPGFFRAEVDKAAPDD
VAAMFFTSGTTGNAKGVVHSHRTLLDRARAGAQFDRLTEREEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESSGTVMIDLKEIGPTYYFAPPRVFEGLLTSVMIRMEDAGAVKRGLFQ
AFMKLARRVGPALMDRQPVGLADRLAWKLGDLLVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFSFYRSIGINLKQLYGSTETAVFVCLQPDDQVRADTVGVPISGVEIQVADNGEILVRSP
GLLKGYYKNPQATAEVLTAEGWYRTSDAGFIDAQGHLKIIDRVKDVGRLKGGASDGAMFA
PKYVENKLKFFPHIKEAVAYGDGREKVCVMVNIDFEAVGNWAERRNLPYAGYTDLAQKPE
VYQLVKDCVEKVNADLAQDAKLAGSQISRFLVLHKELDADDSELTRTNKVRRGYIAEKYQ
VLVDALYGGRAEQYVETQVKFEDGRTGKVSATLKIMDAKTFAPVRAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagtttcccgcgactcttgctcgagcacgccgcccgccggccccatgcggcg
gcgatgcgcgagaaggaatacggcatctggcaggcgcacagctggtcgcaactggcgcag
ctggtcgagcgcctggcctgcggcctgcaccaggccggcctggcgcgcggcgagcacatg
gtggtggtgggcgccaaccgcccgcgcctgtacgcgaccctgctggcggcgcagtcgctg
ggcgccatcccggtgccgctctaccaggacgccgcggccgccgagtgcgtcttccccatc
aacaacgccgaggtgcgcttcgccttcgccgaggaccaggagcaggtcgacaagctgctg
gagatccggccccagtgcccgcggctgcaggcgatctggttcgacgacccgcgcggcctg
cgcaactacggcgagccgggcctggcctcgctggacagcctggccgaggccggcgcggcc
tttgcccaggcccacccggggttcttccgggccgaggtcgacaaggccgcgcccgacgac
gtggccgccatgttcttcacctccggcaccacgggcaacgccaagggcgttgtccacagc
caccgcaccctgctggaccgcgcccgcgccggtgcgcagttcgaccgcctgaccgagcgc
gaggaggtgctggcctacctgccgccggcctggatcgggcagaacatcttcagctacgcg
cagtggctggcctgcggctacgtggtcaactgccccgagtcgtccggcacggtgatgatc
gacctcaaggagatcggcccgacctactacttcgcgccgccgcgcgtgttcgagggcctg
ctcacctcggtgatgatccgcatggaggacgccggcgcggtcaagcgcggcctgttccag
gccttcatgaagctggcccgccgtgtcggcccggcgctgatggaccgccagccagtgggc
ctggccgaccgcctggcctggaagctgggcgacctgctggtgtacgggccgctgcgcaac
aacctggggttctcgcgcgtgcgggtggcctacaccgccggcgaggccatcggccccgac
ctgttctccttctaccgctccatcgggatcaacctcaagcagctgtacggatccaccgag
acggccgtgttcgtctgcctgcagccggacgaccaggtcagggccgacaccgtgggcgtg
cccatcagcggcgtggagatccaggtggccgacaacggcgagatcctggtgcgctcgccc
gggctgctcaagggctactacaagaacccgcaggccacggccgaggtgctcacggccgaa
ggctggtaccgcaccagcgacgccggcttcatcgacgcccaggggcacctgaagatcatc
gaccgggtcaaggacgtcgggcgcctgaagggcggcgcaagcgacggtgcgatgttcgcg
cccaagtacgtggagaacaagctcaagttcttcccgcacatcaaggaggccgtggcctac
ggcgacggccgcgagaaggtgtgcgtgatggtcaacatcgatttcgaggccgtgggcaac
tgggccgagcggcgcaacctgccgtacgccggctacaccgacctggcgcagaagcccgag
gtgtaccagctggtgaaggactgcgtggagaaggtcaacgccgacctggcgcaggatgcg
aagctggccggctcgcagatcagccgcttcctggtgctgcacaaggagctggacgccgac
gacagtgagctcacccgcaccaacaaggtccgccgcggctacatcgccgagaagtaccag
gtgctggtcgatgcgctgtacggcggcagggccgagcagtacgtggagacgcaggtgaag
ttcgaggacggccgcaccggcaaggtgagcgccacgctgaagatcatggatgcgaagacc
tttgcgccggtgagggccgcggcatga
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