Ramlibacter tataouinensis: Rta_35150
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Entry
Rta_35150 CDS
T01544
Symbol
groL
Name
(GenBank) groEL protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rta_35150 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rta03019
]
Rta_35150 (groL)
03110 Chaperones and folding catalysts [BR:
rta03110
]
Rta_35150 (groL)
03029 Mitochondrial biogenesis [BR:
rta03029
]
Rta_35150 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rta04147
]
Rta_35150 (groL)
Enzymes [BR:
rta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rta_35150 (groL)
Messenger RNA biogenesis [BR:
rta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rta_35150 (groL)
Chaperones and folding catalysts [BR:
rta03110
]
Heat shock proteins
HSP60 / Chaperonin
Rta_35150 (groL)
Mitochondrial biogenesis [BR:
rta03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rta_35150 (groL)
Exosome [BR:
rta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rta_35150 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Rta_35150 (groL)
Exosomal proteins of breast cancer cells
Rta_35150 (groL)
Exosomal proteins of colorectal cancer cells
Rta_35150 (groL)
Exosomal proteins of bladder cancer cells
Rta_35150 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AEG94628
UniProt:
F5Y0N4
LinkDB
All DBs
Position
3747881..3749527
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVVFGGDARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDIAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DKAVTALVEQLKKSSKATTTSKEIAQVGSISANSDSSIGEIIAKAMDKVGKEGVITVEDG
KSLENELDIVEGMQFDRGYLSPYFINNPEKQSAILENPFVLLFDKKISNIRDLLPTLEQV
AKAGRPLLIVAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RAKQAAGEIKGDNPDQDAGIKLVLKAIESPLREIVYNAGGEASVVVNAVLAGKGNYGFNA
ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTEAMVAEAPKEEAPAMPGGGMGGM
GGMGGMDM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtagttttcggcggcgacgcccgcgcccgcatggtcgaaggcgtg
aacatcctggccaacgcggtcaaggtcaccctgggccccaagggccgcaacgtggtgctc
gagcgctccttcggcgcccccaccgtgaccaaggacggcgtgtccgtggccaaggagatc
gagctcaaggacaagctgcagaacatgggcgcccagatggtcaaggaagtcgcttccaag
accagcgacatcgccggtgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgcgaaggcatgaagtacgtggccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggctgtcacggccctggtcgagcagctgaagaagtcgtccaaggcgaccaccacc
agcaaggaaatcgcccaggtcggctcgatctccgccaacagcgacagctccatcggcgag
atcatcgccaaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaggacggc
aagtcgctggagaacgaactcgacatcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaacaaccccgagaagcagagcgcgatcctcgagaaccccttcgtg
ctgctgttcgacaagaagatcagcaacatccgcgacctgctgcccacgctggagcaggtc
gccaaggccggccgcccgctgctgatcgtcgcggaagaggtcgagggcgaggccctggcc
accctggtggtcaacaccatccgcggcatcctgaaggtcgtggccgtcaaggcgcccggc
ttcggtgaccgccgcaaggccatgctggaggacatcgccatcctgaccggcggcaaggtg
atcgccgaggaagtcggcctgacgctggagaaggtcacgctggccgacctgggccaggcc
aagcgcatcgaagtgggcaaggaaaacaccaccatcatcgacggcgccggcgccgccgcg
gacatcgaagcgcgcgtcaagcagatccgcgtgcagatcgaggaagcgacttccgactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggcggtgatcaag
gtcggcgccgccaccgaagtcgagatgaaggagaagaaggcccgcgtggaagacgcgctg
cacgcgacccgcgctgccgtggaagaaggcatcgtggccggcggcggcgtggccctgctg
cgcgccaagcaggccgctggcgagatcaagggtgacaaccccgaccaggacgccggcatc
aagctggtgctcaaggccatcgaatcgccgctgcgcgagatcgtctacaacgccggcggc
gaggcctccgtcgtggtgaacgccgtgctggccggcaagggcaactacggcttcaatgcc
gccaacgacacctacggcgacatgatcgagatgggcatcctggacccgaccaaggtgacc
cgcaccgcactgcagaacgccgcgtcggtcgcgtccctgatgctgaccaccgaggccatg
gtggccgaggcgccgaaggaagaggcgcccgccatgcccggcggcggcatgggcggcatg
ggtggcatgggcgggatggacatgtaa
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