Ramlibacter tataouinensis: Rta_35200
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Entry
Rta_35200 CDS
T01544
Name
(GenBank) candidate ABC type dipeptide/oligopeptide transport system, ATP-binding component
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
rta
Ramlibacter tataouinensis
Pathway
rta02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rta_35200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rta02000
]
Rta_35200
Transporters [BR:
rta02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rta_35200
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA_29
AAA_25
AAA_5
RsgA_GTPase
NACHT
AAA_13
nSTAND1
DUF87
Rad17
nSTAND3
PRK
ATP-synt_ab
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEG94633
UniProt:
F5Y0N9
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All DBs
Position
complement(3754696..3755733)
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AA seq
345 aa
AA seq
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MNAVTKPEQAAVQGSAQPLVQARDLAKTFDVSAPWLNRVIERKPRQLLHAVDGVSFDIER
GQTLALVGESGCGKSTVARLLVGLYQPTRGGFVFDGQDAHAAFKTPQGRQLRRRIQMIFQ
DPYASLNPRWIVEDIVGEPLKEHGLITDKAQLRERVGELLKSVGLSPLDMMKYPHQFSGG
QRQRISIARALATQPEFLVCDEPTSALDVSVQAQVLNIMKDLQRKQGLTYLFISHNLAVV
RHVSDRVGVMYLGRLVEVAGKHQLFDNPRHPYTRMLLDAIPKMHDTGKSRTPVQGEVPNP
LNPPTGCAFNPRCPHANERCRVERPALLDIAGVKVACHGVEEGRI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgtgaccaagcccgaacaggccgcggtgcaaggatccgcccagccgctggtc
caggcgcgcgacctggccaagaccttcgacgtctccgctccctggctcaaccgggtgatc
gagcgcaagccgcgccagctgctgcacgcggtggacggcgtgagcttcgacatcgaacgc
ggccagaccctggccctggtgggcgagtccggctgcggcaagagcaccgtggcgcgcctg
ctggtgggcctgtaccagcccacgcgcggcggcttcgtcttcgacggccaggacgcgcat
gccgccttcaagacgccgcaggggcggcagctgcgccggcgcatccagatgatcttccag
gacccgtacgccagcctcaacccgcgctggatcgtggaggacatcgtgggcgagccgctc
aaggagcacggcctgatcaccgacaaggcccagctcagggagcgggtgggcgagctgctc
aagtccgtgggcctgtcgccgctcgacatgatgaagtacccgcaccagttctccggcggc
cagcgccagcgcatctcgatcgcgcgcgcgctggccacgcagccggagttcctggtgtgc
gacgagcccacctcggcgctggacgtgtcggtgcaggcccaggtgctcaacatcatgaag
gacctgcagcgcaagcaggggctgacctacttgttcatctcgcacaacctggccgtggtg
cggcacgtgagcgatcgggtcggcgtgatgtacctggggcgcctggtggaggtcgccggc
aagcaccagctgttcgacaacccgcgccacccctacacgcggatgctgctggacgccatc
cccaagatgcacgacaccggcaagtcccgcacgccggtgcagggcgaggtgcccaacccg
ctgaatccgcccaccggctgcgccttcaacccgcgctgcccgcacgccaacgagcgctgc
cgcgtcgagcggccggcgctgctggacatcgccggcgtcaaggtcgcctgccacggggtg
gaggaagggcggatctaa
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