KEGG   Ramlibacter tataouinensis: Rta_35410
Entry
Rta_35410         CDS       T01544                                 
Symbol
gspD
Name
(GenBank) candidate secretin, general secretion pathway protein D, component of type II secretion system
  KO
K02453  general secretion pathway protein D
Organism
rta  Ramlibacter tataouinensis
Pathway
rta03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rta00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rta_35410 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rta02044]
    Rta_35410 (gspD)
Secretion system [BR:rta02044]
 Type II secretion system
  General secretion pathway protein
   Rta_35410 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AEG94654
UniProt: F5Y0R0
LinkDB
Position
3774676..3776883
AA seq 735 aa
MPFRIAVVSLAAAALLAGAPAFSQTQAQTRRQASPEPVTLNFNNAEIEAVARTMAAITGR
NIVVDPRVKGVITLTTERPVSPQTAYNQFLATLRLSGFTVVDSGGLLKVVPEAEAKLQGG
PVSVGRAPAGNQIVTQIFRLNHETANNLVPILRPLISPNNTINVNPGNNSLVITDYADNL
QRLGRIIAALDVSNATDVEVLPLRHGLAADLAPVVQRLVDSSGGPAAGGPPGQGVGGDAA
LRTTVLPEVRSNSLIVRAANPARLNLVRTLVERLDQPTSQNPTGNIYVVYLKNAEATRLA
VTLRAAMAGLGTGGTAGGGAAGGVGGGVAGGAGASIPAPSSAGSVNAGLGAGGVSSAAAA
PIQPTAAPSTGGQIQADPATNALIITAPEPQYRQLRAVIDRLDSRRAQVYVESLIAEVNA
DKAAEFGVQWQNLIGNINNNIVGAIGTNFTIAGANIINLAAGIAGGEPTTLPSTGGNIGI
ARNIGGTPVLAALARFLETNADGNVLSTPNLLTLDNEEAKIVIGQNVPFVTGQFTNTGAS
NGSVNPFQTIERRDVGLTLRVRPQISENGTVKMQIFQEVSSVDASSVNSPSGLITNKRSI
ESNVIVDDSSIVVLGGLLQDEYAGRQEKIPLLGDVPVLGNLFRAETRSRRKTNLMVFLRP
VVVRDSGQSDELSLDRYDLMRGKQEAAQPRPSSVLQINAAPVLPPAPVPVPPSVRPAPPP
GPPVPAEMAPPSTTR
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgccattccgtattgccgtcgtttccctcgctgcagccgccttgctggcgggggccccg
gccttctcgcagacccaggcccagacccggcgccaggcgtcgcccgagccggtgacgctg
aacttcaacaacgccgagatcgaggcggtggcgcgcaccatggccgccatcaccggccgc
aacatcgtggtcgacccgcgcgtcaagggcgtgatcacgctgaccaccgagcgcccggtg
agcccgcagaccgcgtacaaccagttcctggcgacgctgcgcctgtccggcttcaccgtg
gtggactccggcgggctgctcaaggtggtacccgaggccgaggccaagctgcagggaggg
ccggtgtcggtgggccgggcgccggcgggcaaccagatcgtcacgcagattttccgcctc
aaccacgagaccgccaacaacctggtgcccatcctgcggccgctgatcagccccaacaac
accatcaacgtgaaccccggcaacaactcgctggtgatcaccgactacgccgacaacctg
cagcggctgggccgcatcatcgcggcgctggacgtgtccaacgccaccgacgtggaggtg
ctgcccttgcgccacggactggcggccgacctggcgccggtggtgcagcggctggtggac
tccagcggcggccccgccgcgggcggtccgcccggccagggggtgggaggcgacgccgcg
ctgcgcaccacggtgctgccggaagtgcgcagcaactcgctgatcgtgcgtgccgccaac
ccggcccggctgaacctggtgcgcaccctggtcgagcggctggaccagccgacctcgcag
aaccccacgggcaacatctacgtggtctacctgaagaacgccgaagccacgcgcctggcc
gtgacgctgcgggcggcgatggccgggctcggcacgggcggcaccgcgggcggcggtgcc
gccggcggggtgggtggcggcgtggcgggtggcgccggcgcgtccattcctgcgccgtcc
tccgccggatcggtcaacgccggcctcggcgcgggcggggtcagcagcgcggccgcggcc
cccatccagcccacggcggcgccctccaccggcggccagatccaggccgacccggcgacc
aacgcgctgatcatcaccgcgcccgagccgcagtaccgccagctgcgcgcggtgatcgac
cggctggactcgcgccgcgcccaggtctacgtggagagcctgatcgccgaggtcaatgcc
gacaaggccgccgagttcggcgtgcagtggcagaacctgatcggcaatatcaacaacaac
atcgtcggcgccatcggcaccaacttcaccatcgccggcgccaacatcatcaacctggcc
gcgggcatcgcgggcggcgagccgaccacgctgccgtccaccgggggcaacatcggcatc
gcccgcaacatcggcggcacgcccgtgctggcggcgctggcgcgctttctggagaccaat
gccgacggcaacgtgctgtccacgcccaacctgctgacgctggacaacgaggaggccaag
atcgtgatcggccagaacgtgcccttcgtcaccggccagttcaccaacaccggcgccagc
aacggctcggtcaacccgttccagaccatcgaacgcagggacgtgggcctcaccctgcgg
gtgcggccgcagatcagcgagaacggcacggtgaagatgcagatcttccaggaggtctcc
agcgtggacgccagttccgtcaactcccccagcggcctgatcaccaacaagcgctccatc
gagtccaacgtgatcgtggacgacagctccatcgtggtgctgggcggcctgctgcaggac
gagtacgcgggccgccaggaaaaaatccccctgctgggcgacgtgccggtgctgggcaac
ctgttccgggccgagacgcgcagccgccgcaagaccaacctgatggtgttcctgcggccg
gtggtggtgcgcgactccgggcagagcgacgagctttcgctggaccgctacgacctgatg
cgcggcaagcaggaagcggcgcagccccgccccagcagcgtgctgcagatcaacgccgcg
ccggtgctgccgcccgctcccgtgcccgtgccgccgtccgtccgcccggcgccgccgccc
ggcccgccggtgccggccgagatggctccgccctccacgacccgctga

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