Ramlibacter tataouinensis: Rta_35780
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Entry
Rta_35780 CDS
T01544
Symbol
ung
Name
(GenBank) Candidate uracil DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rta_35780 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_35780 (ung)
Enzymes [BR:
rta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rta_35780 (ung)
DNA repair and recombination proteins [BR:
rta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rta_35780 (ung)
Prokaryotic type
Rta_35780 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG94693
UniProt:
F5Y0U9
LinkDB
All DBs
Position
complement(3820204..3820839)
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AA seq
211 aa
AA seq
DB search
MVDAFFASPAGQRLGEFMRQRLAAGAVIYPPQPLRALELTPLASVRAVILGQDPYHGPGQ
AEGLAFSVAPGVRLPPSLRNIFAELGIVPPHGSLVEWARSGVLLLNASLTVEDGQPGSHA
RKGWELLTDALLARVAATASPCAYLLWGAHAQAKAGLIQAQAAAHGRQALVLQANHPSPL
SARRPPVPFLGCGHFRHARDWLAERGQPGVF
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgacgccttcttcgccagcccggccggccagcgcctgggcgagttcatgcggcag
cggctggcggccggcgccgtgatctatccgccccagcccctgcgcgccctggaactgacg
ccgctggcctcggtgcgcgccgtcatcctgggccaggacccctaccacggccccggccag
gccgaagggctggccttctcggtggcgcccggcgtcaggctgccgccttcgctgcgcaac
atctttgccgaactgggcatcgtgccgccgcacggctcgctggtggaatgggcgcgcagc
ggcgtgctgctgctcaatgccagcctcacggtggaggacggccagcccggcagccatgcc
aggaagggctgggagctgctgaccgacgcgctgctggcccgggtcgccgccacggcttcg
ccctgcgcctacctgctgtggggcgcacatgcccaggccaaggcggggctgatccaggcg
caggcggccgcgcatgggcgacaggcactggtgctgcaggccaaccacccctcgccgctg
tcggcgcgccggccgccggtgccttttctgggctgcggccacttccgccacgcgcgcgac
tggctggccgaacgcggccagccgggcgttttctag
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