Ramlibacter tataouinensis: Rta_36050
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Entry
Rta_36050 CDS
T01544
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rta_36050 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rta03021
]
Rta_36050 (rpoA)
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_36050 (rpoA)
Enzymes [BR:
rta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rta_36050 (rpoA)
Transcription machinery [BR:
rta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rta_36050 (rpoA)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rta_36050 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEG94720
UniProt:
F5Y1D6
LinkDB
All DBs
Position
complement(3844146..3845135)
Genome browser
AA seq
329 aa
AA seq
DB search
MQTNLLKPKAINVEQLGTNRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVSILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
INPDHVIAHLSQGGKIDMQIKVEKGRGYVPGTMRRYADEPTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGSELAAFDA
PVQRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSL
NEIKEVLASRGLTLGMKLESWPPAGLDKR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaacctgctgaaacccaaagccatcaacgtggaacagcttggcacgaaccgc
gccaaggtgacgctggagccgtttgagcgcggctacggccacacgctgggcaacgccctg
cgccgcgtgctgctgtcctcgatggtcgggtatgcggcaaccgaagtcaccatcgccggt
gtgcttcacgagtactcgtccatcgacggcgtccaggaagacgtggtcagcatcctgctg
aacctaaagggcgtggtcttcaagctgcacaaccgcgacgaggtcaccctgtcgctgcgc
aaggacggcgaaggcgtggtcacggccgccgacatccagacgccgcacgacgtcgagatc
atcaaccccgaccatgtgatcgcccacctgtcgcaaggcggcaagatcgacatgcagatc
aaggtcgagaagggccgcggctacgtgcccggcaccatgcgccgttacgccgacgagccg
accaagtcgatcggccgcatcgtgctggacgcttcgttctcgccggtcaagcgggtgagc
tatacggtcgagagcgcccgcgtcgagcagcgcaccgacctggacaagctggtggtggag
atcgagaccaacggcgccatcaccgccgaggacgcggtgcgcgcctccgccaagatcctg
gtcgagcagctggcggtgttcgcgcagctggagggcagcgagctggcggccttcgacgcg
ccggtgcagcgcagctcgcagcagttcgacccgatcctgctgcgcccggtcgacgagctc
gagctgacggtgcgctcggccaactgcctgaaggccgagaacatctactacatcggcgac
ctgatccagcgcaccgagaacgagctgctcaagacccccaacctgggccgcaagtcgctc
aacgagatcaaggaagtcctcgcctcgcgtggcctcacgctgggcatgaaactcgagagc
tggcccccggccggcctcgataagcgttaa
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