Ramlibacter tataouinensis: Rta_36675
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Entry
Rta_36675 CDS
T01544
Name
(GenBank) Conserved hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rta_36675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_36675
Enzymes [BR:
rta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rta_36675
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rta_36675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG94783
UniProt:
F5Y215
LinkDB
All DBs
Position
complement(3898621..3899451)
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AA seq
276 aa
AA seq
DB search
MTLQLDARQRAMLAEFGVRLFEPPATPPPRPAVAPVVAPAVRSAAPAEVRFDLETEQIVP
DPAPALQPGGVAEMDWDALAGTVAGCRACKLCQSRRNTVFGVGDRQADWLIVGEAPGENE
DLQGEPFVGQAGKLLDNMLRAIGLSRRGAPGEEGDGAGGNVYIANVLKCRPPGNRNPEPD
EVAQCEPFLRRQVELLQPKIILAMGRFAVQSLLGTQEPIGKLRGRPHQYHGVPVVVTYHP
AYLLRNLPDKAKAWADLCLALELMAQQPAGRAAAAQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgcagctcgacgcgcgccagcgcgccatgctggccgaattcggcgtgcggctg
ttcgagccgccggcaacccccccgccgcggccagccgttgcgcctgtggtggcgccggcc
gtgcggtccgctgccccggccgaggtgcggttcgacctggaaaccgagcaaatcgtcccc
gatcccgccccggccctgcagccgggcggcgtggccgagatggactgggacgccctggcc
ggaacggttgccggctgccgggcctgcaagctgtgccagagccggcgcaacaccgtgttc
ggcgtgggcgaccggcaggccgactggctgatcgtgggcgaggcgcccggcgagaacgag
gacctgcagggcgagcccttcgtcggccaggccggcaagctgctggacaacatgctgcgc
gccatcggcctgtcccgccgcggcgcgccgggcgaggagggagatggcgcgggcggcaac
gtctacatcgccaacgtgctcaagtgccgcccgcccggcaaccgcaaccccgaacccgac
gaggtggcgcagtgcgagcccttcctgcgccgccaggtcgagctgctgcagcccaaaatc
atcctggccatgggccgcttcgccgtgcagtcgctgctgggcacgcaggagcccatcggc
aagctgcgcggccggccccaccagtaccacggcgtcccggtggtcgtgacctaccacccg
gcctacctgctgcgcaacctgccggacaaggccaaggcctgggccgacctgtgcctggca
ctggagctgatggcgcaacagcccgccggccgggcggcggctgctcagtag
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