Ramlibacter tataouinensis: Rta_37150
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Entry
Rta_37150 CDS
T01544
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_37150
Enzymes [BR:
rta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Rta_37150
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Rta_37150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF4937
Motif
Other DBs
NCBI-ProteinID:
AEG94830
UniProt:
F5Y262
LinkDB
All DBs
Position
complement(3956338..3957909)
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AA seq
523 aa
AA seq
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MTAGLPVTCRRLVLVLGDQLWLENPALEGFDPACDRVLMIEAASEATHVWSHQARIALFL
SAMRHFRKALRDQGWPVLYLALDDDNRPLSFQERLAQVLGSLRPETLWCCEPGEWRLLAL
LQDTAAACEVPLKLLPDTHFMCSREEFAAWAGTRRELRMEFFYREMRQRHRVLMEEGEDG
RQPAGGRWNFDADNRLGYGPAGPGLIPEPLRFAPDAITREVLALVRARFAQHPGSLEHFA
WPVTREQGLAVLRDFIDVRLAAFGPFQDAMWTDTPWGWHALLSSSLNLHLIHPREVVDAA
QAAWRRHRLPLQSVEGFIRQVLGWREFMRGVYWLDMPQLGQDNHFGHQGKLPAWYWTADT
RMNCMRQAVGQTLAHGFAHHIQRLMVTGQFALIAGIRPQEVCDWYLAVYVDAVEWAELPN
TAGMALFANGGRFTSKPYIASGQYIKRMSNYCEGCAYRPEQRHGQLACPVTTFYWAFLDR
HQRWLAGNPRTAMMVRNLSRLSSSERESIRHHAAYLEQRIDRL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccggcctgcccgtgacgtgccggcgcctcgtgctggtgctgggcgaccagctc
tggctggagaacccggcgctggagggattcgatccggcctgcgaccgggtgctgatgatc
gaggccgccagcgaagccacgcatgtctggagccaccaggcgcgtatcgccctgttcctg
tcggcgatgcggcatttccgcaaggcgctgcgggaccagggctggccggtgctctacctg
gccctggacgacgacaaccggccgctgtccttccaggagcgtttggcccaggtgctgggc
agcctgcgccccgagacgctgtggtgctgcgaacccggcgaatggcggctgctggcgctg
ctgcaggacacggcggcggcctgcgaagtgccgctcaagctgctgccggacacgcatttc
atgtgctcgcgcgaggaattcgctgcatgggccggcacccggcgcgagctgcgcatggag
ttcttctaccgggagatgcggcagcgccaccgggtgttgatggaggaaggtgaggacggc
cggcagccggcgggcggccgctggaacttcgacgccgacaaccgcctgggttacgggccc
gccgggccgggcctgatccccgagccgctgcgcttcgcgcccgacgcgatcacgcgcgag
gtgctggcgctggtgcgcgcgcgctttgcgcagcatccgggctcgctcgagcacttcgcc
tggcccgtcacgcgcgagcagggcctggcggtgctgcgggatttcatcgacgtgcggctg
gccgccttcggcccgttccaggatgcgatgtggacggacacgccctggggctggcatgcg
ctgctgtcctccagcctgaacctgcacctgatccacccgcgcgaggtggtcgacgcggcg
caggccgcctggcgccggcaccggctgccgctgcagagcgtggaaggcttcatccgccag
gtgctgggctggcgcgagttcatgcgcggcgtctactggctggacatgccgcagctgggg
caggacaaccatttcggccaccagggcaagttgccggcgtggtactggaccgccgacaca
cggatgaactgcatgcgccaggccgtgggacagacgctggcgcatggcttcgcccatcac
atccagcggctgatggtcaccggacagttcgcgctgatcgccggcatccggccccaggag
gtgtgcgactggtacctcgccgtctacgtggacgccgtcgaatgggcggaactgcccaac
accgccggcatggccctgttcgccaacggcgggcgcttcaccagcaagccctacatcgcg
agtgggcaatacatcaagcgcatgagcaactactgcgagggctgcgcctaccggcccgag
cagcggcacgggcagctggcctgcccggtcaccaccttctactgggccttcctggaccgg
caccagcgctggctggccggcaatccgcgcaccgccatgatggtgcgcaacctgagccgg
ctgtcctcatccgaacgggaatccatccgacaccatgccgcgtacttggaacagagaatc
gaccgactgtaa
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