Ramlibacter tataouinensis: Rta_37730
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Entry
Rta_37730 CDS
T01544
Symbol
prpR
Name
(GenBank) Candidate transcriptional regulator PrpR (Propionate catabolism operon regulatory protein), Fis family
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rta03000
]
Rta_37730 (prpR)
Transcription factors [BR:
rta03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rta_37730 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA
PAS_4
HTH_17
HTH_23
PAS_8
AAA_2
PAS
Mg_chelatase
AAA_3
MerR
HTH_29
HTH_psq
AAA_22
AAA_16
YdaS_toxin
HTH_Tnp_1_2
HTH_28
TIP49
HTH_Tnp_1
Xre-MbcA-ParS_M
MerR_1
Hpr_kinase_C
bpMoxR
PAS_GdpP
Motif
Other DBs
NCBI-ProteinID:
AEG94888
UniProt:
F5Y308
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All DBs
Position
4017016..4018953
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AA seq
645 aa
AA seq
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MDTLHHPPARRPRLCFLSYRQIRAFAMPIVAEYAGRADIEVVDGSFDAALGLAQERIDKG
LVDVFVSAGSNASLLRAGLNVPVATIKLGGFDLLQALIRAREVSPRVGIVTYGQTIPELD
AVKALLNVDIRQYAYTTPEVARRCVAALRADGVAVVVGSSVVVELAQNAGLHGLLAYSLA
SVRQGFEDALELARVARLEAGRYEQLSSVVHHLRQAVLAVNTEARVIAANPAMQAILGLQ
PLVGRPLAELPPELALQPTLATGQGEHDTVLRLAGRDWLARRTPILEQGLVAGAALTLDD
PRQIHEADNLLRIQRRRQQATTRYSFGSLLGQAPAFLAAVQTARRYARSGQGILITGESG
VGKELFAQAIHDAGPQAKRPFVAVNCAAFPESLLESELFGHEEGAFTGARRGGRRGLFEA
AHTGTLFLDEIGDMPLALQSRLLRVLQEREVTRLGGTAAIPVDVCVIAATHRDLAALVAE
GRFRQDLYYRINTLPLALPALRERRQDILPLAEALLRRGLGRLGSTVEPRQVLAPLRGAL
ESHPWPGNIRELENAMERLAVHLLQWSSAGAIDAARLRADFAALLDGVPVPAAGTPPGPL
SGTRSARARQALARSSGRHGEAARALGVSRSTLWRWLREGGDAPA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacaccttgcaccaccctcctgcccgtcggccccggctgtgcttcctcagctaccgg
cagatccgcgccttcgccatgcccatcgtggcggagtacgccggccgcgccgacatcgag
gtggtggacggcagcttcgacgcggcgctggggctggcccaggagcgcatcgacaagggc
ctggtggacgtgttcgtcagcgccggctccaacgccagcctgctgcgcgcggggctgaac
gtgccggtggccaccatcaagctcggcggcttcgacctgctgcaggcgctgatccgggcg
cgcgaggtctcgccccgcgtgggcatcgtgacctacggccagaccatcccggagctcgac
gccgtcaaggcgctgctgaacgtcgacatccgccagtacgcctacaccacgcccgaggtg
gcgcggcggtgcgtggccgccctgcgcgccgatggcgtggcggtggtcgtgggctccagc
gtggtggtggagctggcgcagaacgccggcctgcacggcctgctggcctactcgctggcc
agcgtccgccagggcttcgaggatgcgctcgagctggcccgcgtggcccgcctggaagcc
ggccgctacgagcagctgagcagcgtggtgcaccacctgcgccaagccgtgctcgcggtc
aacaccgaagcccgggtgatcgccgccaatccggcgatgcaggccatcctgggcctgcag
ccgctggtgggccggccgctcgcggaactgccgcccgagctggccctgcagcccacgctg
gcgaccgggcagggcgaacacgacaccgtgctgcggctggccggccgcgactggctggcg
cgccgcacgcccatcctcgagcaggggctggtcgccggcgcggcgctcaccctggacgat
ccgcgccagatccacgaggcggacaacctgctgcgcatccagcggcggcgccagcaggct
accacccgctacagcttcggcagcctgctgggccaggcgcccgccttcctggcggcggtg
cagacggcgcggcgctacgcgcgcagcggccagggcatcctcatcactggcgagagcggc
gtgggcaaggagctgttcgcccaggccatccacgacgccgggccgcaggccaagcggccg
ttcgtcgcggtgaactgcgccgccttccccgagagcctgctggagagcgagctgttcggc
cacgaggagggcgccttcaccggcgcgcggcgcggcggccggcgcgggctgttcgaggcg
gcccacaccggcacgctgttcctggacgagatcggcgacatgccgctggcgctgcagtcg
cgcctgctgcgggtgctgcaggagcgggaggtcacccgcctgggcggcaccgccgccatc
ccggtggatgtctgcgtcatcgcggcgacccaccgcgacctggccgcgctggtggccgaa
ggccgcttccgccaggacctgtattaccgtatcaacaccctgccgctggcgctgccggcg
ctgcgcgagcgccgccaggacatcctgccgctggccgaggccctgctgcgccgcggcctg
ggccggctcggctcgacggtggagccgcggcaggtgctggcgccgctgcgcggcgcgctg
gagtcgcacccctggccgggcaatatccgcgaactggagaacgcgatggagcggctggcc
gtgcacctgctgcaatggtcctcggccggcgccatcgatgccgcgcggctgcgtgccgac
ttcgccgcgctgctcgatggcgtgccggtcccggccgcggggacgccaccggggccgctc
tcaggcacccgcagcgcgcgcgcccggcaggccctggcccgcagcagcggccggcacggc
gaggccgcccgcgcgctgggcgtgagccgctccaccctgtggcgctggctgcgcgagggc
ggggacgcgcccgcctag
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