Ramlibacter tataouinensis: Rta_38200
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Entry
Rta_38200 CDS
T01544
Symbol
trmE
Name
(GenBank) candidate tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rta03016
]
Rta_38200 (trmE)
Transfer RNA biogenesis [BR:
rta03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Rta_38200 (trmE)
Prokaryotic type
Methyltransferases
Rta_38200 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Arf
RsgA_GTPase
NOG1
ABC_tran
ABC_ATPase
AAA_29
AAA_28
AAA_25
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEG94936
UniProt:
F5Y356
LinkDB
All DBs
Position
complement(4066126..4067445)
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AA seq
439 aa
AA seq
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MRVSGQSVQPVIAALCGRALKPREATYLAFRAADGTPIDHGLAIHFPAPHSYTGEDVLEL
QAHGGPVVLQLLLARCLEAGQAMGLRVAEPGEFTQRAFLNDKIDLAQAEAIADLIDASTE
AAARSASRSLAGEFSREVHQLRDALVQLRMLVEATLDFPEEEIDFLKQSDAQGQLDRLRD
RLDQVLARTRQGALLREGIQVVIAGQPNAGKSSLLNALAGAELAIVTPIPGTTRDVVSQT
LQIEGVPVHVVDTAGIRPQGEGADPVERIGIERAWGRIAQADAVVFLHDLTRTALADYRA
ADEAIAHSLREKLPQAVPVIDVWNKADAAVPPSPPATSLTLSAKTGAGLDLLRRRLLEVA
GWQSAPEGLFIARQRHVQALRQVGQHLALAEAHLAPQALALELLAEELRLAQSALAAITG
EFTADDLLGVIFSSFCIGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgtcgggccaaagcgtgcagccggtcatcgccgcgctgtgcggccgggcgctg
aaaccgcgcgaggcgacctacctggcgttccgcgccgccgacggcacgcccatcgaccac
ggcctggccatccacttcccggcgccgcattcctacaccggcgaggacgtgctggagctg
caggcgcacggcgggccggtggtgctgcagctgctgctggcgcgctgcctggaggccggc
caggccatgggcctgcgcgtggccgagcccggcgagttcacccagcgcgccttcctcaac
gacaagatcgacctggcccaggccgaggccatcgccgacctgatcgacgccagcaccgag
gccgcggcgcgcagcgccagccgctcgctggccggcgagttctcgcgcgaggtgcaccag
ctgcgcgacgcgctggtccagctgcgcatgctggtggaggcgacgctggacttccccgag
gaggagatcgacttcctgaagcagtccgacgcccagggccagctggaccggctgcgggac
cggctggaccaggtgctggcgcgcacccgccagggcgcgctgctgcgcgagggcatccag
gtggtgatcgccggccagcccaacgccggcaagagctcgctgctcaacgccctggccggc
gccgagctggccatcgtcacgcccattcccggcaccacgcgtgacgtggtcagccagacc
ctccagatcgagggcgtgccggtgcacgtggtggataccgccggcatccgcccccagggc
gaaggcgccgacccggtggagcggatcggcatcgaacgggcctggggccgcatcgcgcag
gccgacgcggtggtgttcctgcacgacctgacgcggacggccctcgccgactaccgggcc
gccgacgaggcgatcgcgcacagcctgcgcgagaagctgccgcaggcggtgccggtgatc
gacgtctggaacaaggccgacgcggcggttcctccctccccccccgccacctcactcacc
ctctccgccaagaccggcgccggcctggacctcctgcgccggcgcctgctcgaggtggcc
ggctggcaatccgcccccgaaggcctgttcatcgcccgccagcgccacgtccaggccctg
cgccaggtcgggcagcacctggcgctggccgaggcgcatctggcgccgcaggccctggcc
ctggagctgctggccgaggagctgcgcctggcgcagagcgcgctggcggccatcaccggc
gaattcaccgcggacgacctgctgggcgtcatcttctccagcttctgcatcggcaagtag
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