Rickettsia typhi B9991CWPP: RTB9991CWPP_01175
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Entry
RTB9991CWPP_01175 CDS
T01810
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rtb
Rickettsia typhi B9991CWPP
Pathway
rtb00470
D-Amino acid metabolism
rtb00550
Peptidoglycan biosynthesis
rtb01100
Metabolic pathways
rtb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RTB9991CWPP_01175 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RTB9991CWPP_01175 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RTB9991CWPP_01175 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtb01011
]
RTB9991CWPP_01175 (ddl)
Enzymes [BR:
rtb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RTB9991CWPP_01175 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rtb01011
]
Precursor biosynthesis
Amino acid ligase
RTB9991CWPP_01175 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFE54938
LinkDB
All DBs
Position
304810..305775
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AA seq
321 aa
AA seq
DB search
MNKYQTHLLEHSVVKILSGTGKKHIALVAGGMSAEREVSLISSVGVSKALIELGYKVTFI
DMGADIAVKLQEINPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGVLSSALAFDKIHS
RSCFLKNNINMADSIVVSKSDHINTDPMKRPYVIKPLKQGSSIGVEVIFEEDDFHFIDYD
FPYGEDIIIEQYIQGQELQVALLNGKALGVLEIKLLKNRFYDYETKYNKGFAKHVCPAQL
PANLYKKLLIESEKIYKTINCKGPVRAEFILEEQTNKLYVLEINTHPGMTPLSIVPEIAA
YAGISFTNLIEEIIKMASFES
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatatcaaacacatttgctagaacactctgtagtaaaaatattaagtggtacc
ggtaaaaagcatatagcattagtagctggtggtatgtctgccgagcgtgaggtatcttta
atatcaagtgttggagttagtaaagctttaattgaattaggatataaagttacatttatt
gatatgggggcagatattgcggttaaattacaagaaataaaccctgatattgtttttaac
tgtttacatggtacatatggtgaagatggttgtttaccaggattacttaatataatgcgt
attccttatactcatagtggtgtattatcttcagcgttagcattcgataaaatacactct
agaagctgtttcttaaaaaataatattaacatggcagacagcattgttgttagtaaaagc
gatcatataaacactgatcctatgaagcgaccatatgtaataaaacctcttaagcaagga
tcaagtattggtgttgaagtaatatttgaggaagatgattttcactttatagattatgat
tttccttatggtgaagatataataatagagcagtatatacaagggcaagaattgcaagta
gcattattaaatggtaaagctttaggtgttttagaaattaaattactaaaaaatcgtttt
tatgattatgaaactaaatataataaaggatttgctaagcatgtgtgtcctgcccagctg
cctgctaatttatataaaaaattactgatagaatcagaaaaaatttataaaacaataaat
tgtaaaggtcctgttagagcagagttcattttagaagagcagacaaacaaattatatgtt
ttggagatcaatacacaccctgggatgacgcctttatcaatagtgccagaaattgcagct
tatgcagggataagttttactaacttaattgaagaaattataaagatggcaagttttgaa
tcatga
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