Rickettsia typhi B9991CWPP: RTB9991CWPP_01210
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Entry
RTB9991CWPP_01210 CDS
T01810
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rtb
Rickettsia typhi B9991CWPP
Pathway
rtb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RTB9991CWPP_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtb03019
]
RTB9991CWPP_01210
03009 Ribosome biogenesis [BR:
rtb03009
]
RTB9991CWPP_01210
Enzymes [BR:
rtb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RTB9991CWPP_01210
Messenger RNA biogenesis [BR:
rtb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RTB9991CWPP_01210
Ribosome biogenesis [BR:
rtb03009
]
Prokaryotic type
rRNA processing factors
RTB9991CWPP_01210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AFE54945
LinkDB
All DBs
Position
312675..314726
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AA seq
683 aa
AA seq
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MHKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLSITESTFPVNAFPEIALANITIEDDQEKPPVIYDSLID
SEEIDLKTIEDLVDSKFQSEFNLESADDIEIIQSCTTELNIPQYKPYKVQDVIRKNQVLL
VQVTKEERGNKCAAFTTYISLAGKYCVLMPNKSSQNGISRKISNGEERKRLKDILNKIVS
IQKNTYSVIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFSAPCFIHEEDSIIRKTI
RDMCDHNVKEVVIQGQEAYEDASKFMQDLLPSELTKLKEHKNKTPIFTQFQVEEQLVKLY
QPIVTLPSGGYIVINPTEALISIDVNSGKSTSEKNIEETALKTNLEAAKEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSEVCFHCNGKGVIRASDANAMLILRTIENEIFEERIDIINVFTNIVSVIYLLNNKRAEI
KFIEEKYNIKLNFYSDPNATSDSYSIEKVKLFKKQNNSVNTVKPVIQNHSADYTEEEPKK
EQLRKNKHKWKTANNNIVNAVKDQSVEQTVNIVEEMKVIENNGISLEETQVTPKNAKRKY
RNKNLNKKRLADSIVDGENGAES
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaaagattataattgatgctaatttcccaagtgaaacaagagtggttttatta
ggacaaagtaacaatatagaagatattgagtttcaaacaaccgtaagacaacaaaataaa
ggtaacatttatttagcaaaagtgacaagaatagaaccgtcgctacaagctgtgtttata
gagtatggaatggataaaagtgggtttttaccgtttagtgaaatccatcctaactattat
aatttgtctattactgagagtactttcccagttaatgcttttcctgaaatagctcttgcc
aatatcacgattgaggatgatcaagagaagccacctgttatatatgattctttgattgat
agtgaagaaattgatctcaaaacaatagaagatttagtagatagtaaatttcagtcagag
tttaatttagagtcagctgatgatattgaaattattcaaagttgtaccactgagttaaat
attccacaatataaaccatataaagtgcaagatgtaataagaaaaaaccaagtattatta
gtgcaagttactaaggaagagcgaggaaataagtgtgctgcatttactacttatatatct
ttggctggtaaatattgtgttttaatgcctaataaaagttcacaaaacggtatatcgcgt
aaaatatcaaacggcgaagaaagaaaaagactgaaagatattttaaataaaatagtaagt
attcaaaaaaatacttatagcgtaattgttagaactgcaggtagaggcagtagtacctta
gacttgaagaaagactataattacttagcaagattatggaataaaattcgtaaaagtact
attaaattttcagcaccgtgttttattcatgaagaagatagtataatacgtaaaactata
cgtgatatgtgtgatcacaatgttaaagaagtagtgattcaaggacaggaagcatatgaa
gatgcttcaaaatttatgcaagatttattaccttcagaacttacaaagctgaaagagcat
aaaaataaaacacctatatttactcaatttcaagtagaagagcaattagtgaaattatat
cagcctatcgttacactaccttcaggtgggtatatagttattaatcctacagaagcgttg
atttcaattgatgtcaattctggtaaatcaacttctgaaaaaaatattgaagaaactgcg
ctaaaaactaatttagaagcagcaaaagaagtagcaaagcaagtaaaacttagagattta
tcaggtttaatagtcgttgattttatagacatgagcgaagctaagaatcgtaaaatcatt
gaacgatcttttaaagaatttttaagtcgtgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactacttgaattttcaaggcagcgattacgttcctctttcttagaaact
aattcggaagtttgtttccattgcaatggtaaaggagttattagagcgagtgatgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatataata
aatgtttttaccaatatcgtttcagtgatttatttacttaataataaacgtgctgagata
aaatttattgaagaaaaatacaatataaagcttaatttttattccgatcctaatgctaca
tcagatagttattcaattgaaaaagttaaattatttaagaaacagaacaatagtgttaat
actgttaagccggtaattcagaatcatagtgctgattatactgaagaagaaccaaaaaaa
gaacaattacgaaaaaataaacataaatggaaaacagctaataataacattgttaatgca
gtaaaagatcagagtgtagagcaaactgtaaacattgtggaagagatgaaggttatagaa
aataatggtatatccttagaagaaacacaagtcactccaaaaaatgcgaaacgtaagtac
cgtaataaaaatttaaataaaaaacgtcttgcggatagcatcgtggatggagaaaatggt
gctgagtcttga
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