Rickettsia typhi B9991CWPP: RTB9991CWPP_01555
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Entry
RTB9991CWPP_01555 CDS
T01810
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rtb
Rickettsia typhi B9991CWPP
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtb03032
]
RTB9991CWPP_01555
03400 DNA repair and recombination proteins [BR:
rtb03400
]
RTB9991CWPP_01555
Enzymes [BR:
rtb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RTB9991CWPP_01555
DNA replication proteins [BR:
rtb03032
]
Prokaryotic type
DNA Topoisomerases
RTB9991CWPP_01555
DNA repair and recombination proteins [BR:
rtb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RTB9991CWPP_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
HTH_25
POLR3C_WHD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFE55014
LinkDB
All DBs
Position
complement(401416..403755)
Genome browser
AA seq
779 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDKNFAMEYDISDKASK
YVDAIVKYARKAEAVYLATDPDREGESISWHVAEVIKEKNKVESDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICD
REDEIERFKAEEYWDISLKMQNSNNELFTAKLTHVNDQKLKKFSIINEKEAKDLTRKLKL
QKFYVEKIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKNYGNKYLPINPRIYQSKVKNAQEAHEAIRPTNIT
YTPDNLKQKLEKDYYKLYELIWQRTIACQMENVIMDLVIANLASENKEYLAKANGSIIAF
DGFYKVYRESLDDEDEEDNKMLPPLKAQEHIKTKEVIPNKHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVTLEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKTSLNNFWSGFNNNIESVNEQKITEIINYLQKALDYHLFGENKESKVC
PSCKTGQLSLKLGKFGAFLACSNYPECTFKKSIVSGNDNNEDEGNLSTILNDNKILGTDK
DGVEIYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLKQSEITLEVALKLLSLPLKIGIHK
DSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLNLDDAIKLIENNKAKLEKKHRSMV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcaccagcaaaggcaaaaacaataaataaatatttaggc
gatgagtttaaggttattgcatcatttggtcatattagagatttaccatctaaaaaaggt
tcggtattgcctgataaaaattttgcaatggaatatgatatttcagataaagccagtaaa
tatgtagatgcaatagttaaatatgcgagaaaagccgaggcagtatatcttgcaactgat
cctgatcgtgaaggcgaatctatctcatggcatgttgcagaggtaataaaagaaaaaaat
aaggttgaatcagatgatttttttaaaagagtagcatttaatgagattactaaaaaagca
attattcatgcagttgaaaaccctaggaaactagatactaacttagtcaatgcacagcaa
gcaagaagggctttagactatttagtcggatttaccctttcacctcttttatggcgtaaa
ttacctggctgtaaatcagcaggacgcgtacagtctgtagctctgcgattaatatgtgat
cgagaagatgaaatagagcgtttcaaagcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcatgtaaacgatcaaaagtta
aaaaaattctcaattattaatgaaaaagaagccaaagatttaacacggaaattaaagtta
caaaaattttatgttgaaaagatagaaaagaaacaacaaaaacgtcaaccacaaccgcct
tttattacttcatcactacaacaagaagcagcaagaaaactaggttttagtgctaaaaag
acgatgcaaatagcacaaaaactttatgaaggtgttgatataggtaaagaaactatagga
ctgattacttatatgagaaccgatggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaaattatggcaataaatatttaccaattaaccctagaatttat
caatccaaagtaaaaaatgctcaagaagctcatgaagcaataagaccaacaaatattact
tatactcctgataatttaaaacaaaagctagaaaaagattattataagctttatgaacta
atttggcaaagaactatagcctgccaaatggaaaatgttataatggatttagtaattgca
aatttagcttcagaaaataaagaatatttagcaaaagcaaatgggtcaattatagcattt
gatggtttttataaggtttatcgtgaaagtctagatgatgaagatgaagaagataataaa
atgctaccacctttaaaagcacaagaacatattaaaactaaagaagttattccaaataag
cattttaccgagccacctccaagatattcagaagcaagtttagtcaagaaacttgaagag
cttggtatcggtcgtccttcaacttatgctagtattttatcagttttacaagatcgaaaa
tatgttacacttgagaaaaaacgttttatacctgaagagcttggacgtttagtaacagta
tttttagttggtttttttaaaaaatatgtagaatatgattttactgctggtcttgaaaat
gaattagacgaaatagctgcaggcaaacttgaatggaaaacttctttaaataatttttgg
agtggttttaataataatattgaatcggtaaatgaacaaaaaataaccgaaattattaac
tatttacagaaagctcttgattatcatctatttggtgagaataaagaatctaaagtatgt
ccatcatgcaaaactggtcagcttagcttaaagcttggtaaatttggagcatttttagca
tgtagtaattatcctgaatgtacttttaaaaaatctattgtgagcggtaacgataataac
gaggatgaaggcaatctttcaactattcttaatgataataaaattttaggtactgataaa
gatggagtggaaatatatcttaaaacaggaccttatggaccttatattcagcttggcgaa
caatgcggcaaagtaaagccaaaacgtactcctgtacctactaacttaaaacaaagtgaa
atcacacttgaagttgcattaaaactcctaagcttaccactgaaaatcggtattcataag
gatagcggagaggaaattataataggatacagtaaattcggcccctacataaaatatatg
tgtaaatttatttcggtgccaaaaaaatatgattttctaaatttaaacttagatgatgca
attaagctaattgaaaacaataaagcgaaattagaaaagaaacatagatcaatggtttaa
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