Rickettsia typhi B9991CWPP: RTB9991CWPP_02215
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Entry
RTB9991CWPP_02215 CDS
T01810
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rtb
Rickettsia typhi B9991CWPP
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtb03016
]
RTB9991CWPP_02215
Enzymes [BR:
rtb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RTB9991CWPP_02215
Transfer RNA biogenesis [BR:
rtb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RTB9991CWPP_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF5638
Motif
Other DBs
NCBI-ProteinID:
AFE55146
LinkDB
All DBs
Position
complement(575550..576395)
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AA seq
281 aa
AA seq
DB search
MQIIDKQKTLEEFCDRLAHHKSLSIDTEFERRYTYYAQLSIIQVKAEGYCGIIDTLSNLD
LNIFNKLLIDNNITKIFHAPREDLEIFYNLFKTLPSNIFDIQIAASICGFGQQLSYDNLC
YKLIGITIDKTHQKSNWLKRPITSDMLNYAILDVEYLYKIYKELNNIIISNNLTNKYQHT
LGTLLNVRNYKVELKDAWKKIRYKSDDKNFNRIIQILAAYREENAQTINIPRQHFILDED
LIKLCKNNPLNYKDFKNLKLKSKYLHKQKYKDEIISLFNNL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattatagataaacaaaaaacactagaagaattttgtgacaggttagcacatcat
aaatctttaagcatagatactgagtttgagcgtcgctatacttattatgctcagcttagt
ataattcaagttaaagcagaaggatattgcggaataattgatacattaagtaatttagat
ttaaatatttttaataagctacttatagataataatattactaaaatatttcatgcgcct
cgtgaagatttagagattttttataatttatttaaaacactaccttctaatatttttgat
atacaaattgcagcaagtatttgcggcttcggtcaacagttaagctatgataatctttgc
tataagttaatcggtattactatagataaaactcatcaaaaatctaactggctaaaacgc
cctatcactagtgatatgttaaattatgctatattagacgtagagtatttgtataaaata
tataaagaattaaataatataattattagcaataatttaactaataaatatcagcatact
cttggtactttgttaaatgttagaaattataaggttgaattgaaagatgcatggaaaaaa
ataagatataaaagtgatgataagaattttaatcgcataattcaaatacttgcagcctat
cgtgaagaaaatgcacaaactataaatattccacgtcagcattttattttagacgaagat
ttaataaagctttgtaaaaataatccattgaattataaagattttaaaaatctaaaatta
aaaagtaaatacttacataaacaaaaatataaagatgaaataataagtttatttaataac
ttataa
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