Rickettsia typhi B9991CWPP: RTB9991CWPP_02495
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Entry
RTB9991CWPP_02495 CDS
T01810
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rtb
Rickettsia typhi B9991CWPP
Pathway
rtb03410
Base excision repair
rtb03430
Mismatch repair
rtb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RTB9991CWPP_02495
03430 Mismatch repair
RTB9991CWPP_02495
03440 Homologous recombination
RTB9991CWPP_02495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtb03400
]
RTB9991CWPP_02495
DNA repair and recombination proteins [BR:
rtb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RTB9991CWPP_02495
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RTB9991CWPP_02495
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RTB9991CWPP_02495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFE55202
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Position
complement(656183..657943)
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AA seq
586 aa
AA seq
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MKPQISINGKIWKQKQIKEDIVTELCRSFKISDLLARIVSLRVNNLAEVENFLIPKIKNL
LPDPFHLLDMDKAVDRIVQAIVHNQQICIFADYDVDGATSAALLKHLLRDLNIICDIYVP
DRIYEGYGPTPLAIQKIKDNGTELLITVDCGAMAHDALKYAKDVKLDVIVIDHHISTAIL
PDAVAIVNPNRIDETSEYKYLAAVGVTFLFATAILSNLKKRNYFSQSIPTPNLMQYLDLV
ALGTVCDMMKLTGLNRAFVATGLKVMQQRQNIGIKTLYDIAGINEIPQCYHLGFILGPRI
NAGGRVGKSNLGANLLATSCHNEASKLANELEKYNNERKVIELLMIDEAIDIALTQKDSS
LLFVVKEGWHPGVIGIVAGRLKEKFDKPVAVVALNNGIGKASCRSILGIDFSAEIINAKS
KDLIIAGGGHAMAAGFTVTAGKLEELQDFLNNAFSISINKLANYKHAEYDIDLTVNSVNF
YLMEELKILEPFGSGNHEPIFKFDDLFILKADIVGSKHIKCMLAPDKRGFGNKVLSAIAF
DAVGTPFEDILLSSRAKHISAIGTLKTNNWKDNYTIQLIIKDLLLK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacagatatctataaatggtaaaatatggaaacagaagcaaattaaagaagat
atagtaacggaattatgtcgtagttttaaaattagtgatctacttgctagaatagtatca
ttaagagtcaataatttagcggaagtagaaaattttttgataccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggataaggcagtcgatagaatcgttcaagct
attgtacataatcaacaaatctgtatctttgcagattatgacgtagacggtgctacttca
gcagcgttacttaagcatcttttacgagatttaaatataatatgtgatatttatgttcct
gatcgtatatatgaaggatacggtccaacgcctttagctatacaaaaaattaaagataat
ggaactgaattattaattacggttgattgtggtgctatggcacatgatgcattgaaatat
gcaaaagatgttaaacttgatgttatagtcattgatcatcatatttctactgcaatatta
ccggatgcagtagctatagtaaatccaaatcgtattgatgaaacaagtgaatataaatat
ttggccgcagtaggtgttacgttcttatttgcaactgcaatattatcaaatttaaagaag
cgcaattatttctcgcaaagcataccgactcctaacttaatgcagtatctagatttagtt
gcccttggtactgtttgcgatatgatgaaattaacaggtttgaatcgtgcatttgtcgca
actggattaaaagtaatgcagcaaagacaaaatatcggtattaaaacattatatgatatt
gcagggattaatgaaataccgcaatgttatcatttaggttttattttaggtcctcgtata
aacgcaggtgggagagtaggtaagtcaaatttaggtgctaatcttttagctactagttgt
cataatgaagcaagcaaattagctaatgaactggaaaaatataataatgagcgtaaagta
attgagttattaatgatcgacgaggccatagacattgctttaactcaaaaagatagtagt
ttattatttgttgtgaaagaaggatggcatccaggtgttatagggatcgttgcaggaaga
ttaaaagaaaaatttgataagccagtagcagttgtggctttaaataacggtattggtaaa
gcttcatgtcgttcaattttaggtattgattttagtgctgaaattatcaatgctaaaagt
aaagatttaataatagccggtggaggtcatgctatggcagcaggatttaccgtaactgct
ggcaaattagaagaattgcaagattttttaaataatgcttttagcattagtataaataaa
ttagcaaattataaacatgctgaatatgatattgatttaacggttaatagtgtgaatttt
tatttaatggaggaattaaaaattttagagcctttcggttcaggaaatcatgagccaata
tttaaatttgatgatttatttatattaaaagctgatatcgttggaagtaaacatattaaa
tgtatgcttgcgccagataagcgaggctttggtaataaagtattgtctgctattgctttt
gatgctgtaggtactccatttgaagatatcttattaagttctcgcgcaaaacatatttct
gcaataggcacgttgaaaacgaataattggaaagataattatactattcagttaattata
aaagatttactgttaaaatag
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