Rickettsia typhi B9991CWPP: RTB9991CWPP_04105
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Entry
RTB9991CWPP_04105 CDS
T01810
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rtb
Rickettsia typhi B9991CWPP
Pathway
rtb03030
DNA replication
rtb03430
Mismatch repair
rtb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RTB9991CWPP_04105
03430 Mismatch repair
RTB9991CWPP_04105
03440 Homologous recombination
RTB9991CWPP_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtb03032
]
RTB9991CWPP_04105
03400 DNA repair and recombination proteins [BR:
rtb03400
]
RTB9991CWPP_04105
Enzymes [BR:
rtb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RTB9991CWPP_04105
DNA replication proteins [BR:
rtb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RTB9991CWPP_04105
DNA repair and recombination proteins [BR:
rtb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RTB9991CWPP_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
RuvB_N
AAA_5
AAA_30
AAA_19
AAA_18
ResIII
AAA_assoc_2
TIP49
Viral_helicase1
Rad17
RNA_helicase
nSTAND3
AAA_16
AAA_17
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AFE55524
LinkDB
All DBs
Position
1091886..1093088
Genome browser
AA seq
400 aa
AA seq
DB search
MLENSSNQYIPFARKYRPNNFTELQGQEVLVKILSYTILNDRLVGGYLLTGIRGVGKTTS
ARIIAKAVNCSALITENMTIKTCEKCTNCVSFNNHNHPDIIEIDAASKTSIDDIRRIIES
AEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHVIFIFATTEVQKVPSTIISRC
QRYDLRRLSFEEIFKLLKYITKQENLIADIEALRIIAHKSEGSARDAVSILDQAASMSAK
SDNIISSQIINQMLGLVDASFILEFIEKIISKETEKAINLINKLYYRFSVNLETFIQSVA
DFIAYLNKVKILPNYSLPIYESFNYRTKSILAKISLAHLSILWQIYNKGVTEIKISYNQL
IETEMLVIKSIYSTSLPLLNDSNANIMNADNSGIKKNLKF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaaaattcatctaatcaatatattccttttgcaaggaaatatcgtcctaataat
tttactgaactgcaagggcaagaagtactagtaaaaattttaagctatactattttaaac
gatagactagtcggaggttatcttttaactggtattagaggtgttggcaaaactacctca
gctcgtattattgctaaagccgtaaattgttctgccttaattactgaaaatatgactatt
aaaacatgtgaaaaatgcacaaattgtgtcagttttaataatcataatcacccagatata
attgaaattgacgcagcaagtaaaactagcatagatgatatacgtagaattatagaatct
gctgaatataaacctctacaaggtaaacataaaatctttattattgatgaagtgcatatg
ctctctaaaggagcatttaacgcacttcttaagactttagaagaaccaccacctcacgta
atatttatttttgcaacaactgaagtacaaaaggtaccttcaactattatctcaagatgt
caacgttatgatttaagacgtttaagttttgaagaaatctttaagctacttaaatatata
actaagcaagaaaatttaatagcagatatagaagcattaagaattatagctcataagtct
gaaggttcagcacgtgatgcagtgtctattttagatcaagcagctagtatgtctgcgaaa
tctgataatataattagttctcaaataattaatcaaatgcttggacttgttgatgcttca
tttatattagaatttatagaaaaaataattagtaaagaaacagaaaaagctataaattta
ataaataagctttattatcgtttttcggttaatcttgaaacttttatacaatcagtagca
gattttattgcttatcttaacaaagtaaaaatattacctaattatagtctaccaatatat
gaatcatttaattataggactaaaagcatattagctaaaatcagtttagcacacttatca
atcttatggcaaatatataataagggagtcacagaaataaaaatttcctataatcaacta
atagagacggaaatgttagttataaaatctatatattcaacgtcactgccgctacttaat
gattctaatgctaatataatgaatgcagataattcaggaataaaaaaaaatttgaaattt
tag
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