Rathayibacter toxicus WAC3373: APU90_00220
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Entry
APU90_00220 CDS
T04269
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rtc
Rathayibacter toxicus WAC3373
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtc03032
]
APU90_00220
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_00220
Enzymes [BR:
rtc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
APU90_00220
DNA replication proteins [BR:
rtc03032
]
Prokaryotic type
DNA Topoisomerases
APU90_00220
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APU90_00220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALS56414
UniProt:
A0A0U1PR98
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Position
44026..46491
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AA seq
821 aa
AA seq
DB search
MNAASLSSGSSLTERIEDVDVSAEMEGSFLEYAYSVIYSRALPDARDGLKPVQRRILFMM
SEMGLRPDHGHVKSARVTGEVMGKLHPHGDASIYDSLVRLAQPFTMRVPLVDGHGNFGSL
DDGPAAARYTEARLAPAAIAMTEHLGENVVEFIPNYDNSHEQPEVLPAAFPNLLVNGASG
IAVGMATNMAPHNLVEVVAAARHLIAHPDASLDDLMAFVPGPDFPSGGTIVGLAGVRDAY
ATGRGSFKTRARVSIESITARKSGLIVTELPYLVGAEKVIDKIKDGVQNKKLSGIADVVD
LTDRDNGLRLVIGIKTGFSPEAVLEQLYRYTPLEDTFAINNVALVDGGPRTLGLKELLQV
YIDHRLQVVTRRSRYRLNKRQERLHLVEGLLIAMLDIDEVIQLIRGSDDTAGARGRLIDI
FELSTIQADYILELQLRRLTKFSRIELETERDTLVSEIAELEALLASRARLEELVSDELD
QVAQRLGTPRRTLLTEARPSAASTGRKAAAVLEIADVPCRVLLSTTDRIVRFDRDTSALP
QPRRVSRRSKHDAILSMLDTSTRTEIGAVTTAGRLLRFSSVDVPAVPSSSVQLGAGVRMN
DYLPHLAKDERVLALVALDDSRPIGLGTVRGIVKRVFLSELPSRPDIELIALKPEDAVIG
AAPAADEDELVFVTGEAQLLRFSASAVRPQGRSAAGMAGVKLGETDEAVHFAVVADRERD
VVVATVAIDSWALSDTDTGSAKVSAFSEFPAKGRATSGVRAQRFLKGETALRVAWVGPGP
AHALEADGSVATLPESGMKRDSSGVALSTPIASIGAAPELF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcaagcttgtcctccggatcctccctcaccgagcgcatcgaggatgtcgac
gtttcggccgagatggagggctccttcctcgaatacgcctattccgtcatttactcacga
gccctacccgatgcgcgcgacggtctcaaacctgtgcagcggcggatcctcttcatgatg
agcgagatgggactgcgccccgatcacgggcacgtgaagtcggcgcgcgtgacgggcgag
gtcatgggcaagctgcaccctcatggcgacgcgtctatctacgactccttggtgcgcctc
gcacagccctttacgatgcgcgtgccgctcgtcgatggtcacggcaacttcggttcactc
gatgatggtcctgcggccgctcgttacacagaagcacgcttggcaccggccgcgatcgcc
atgacggagcacctcggcgagaatgtggtcgagttcattccgaactacgacaattcgcac
gagcagccggaggtgcttcccgcggcattcccgaatctgctggtcaacggggcgagcggt
atcgcagtcggtatggcgaccaatatggcaccgcacaacctggtcgaggtggtggcagcc
gcacggcacctcattgcgcaccccgacgcttctctcgacgacctgatggcgtttgtgccc
ggcccagacttccccagcgggggtaccatcgtcggccttgccggcgtgcgcgacgcgtac
gcaaccgggcgtggcagcttcaaaacccgcgcccgcgtatcgatcgaaagcatcacggcc
cgtaaatcgggacttatcgtcaccgagctgccctacctcgttggtgccgagaaggtgatc
gacaaaatcaaggacggtgttcagaacaaaaagctcagcggtatcgccgatgtggtcgat
ctcaccgaccgcgataatggcctccgccttgtgatcggaatcaaaaccggtttcagcccc
gaggctgtgctcgaacagctctatcgttacacgccactggaggacactttcgcgatcaat
aacgtcgcgctagtcgacggcggcccgcgaacactggggctcaaagaactgcttcaggtg
tatatcgaccaccgcctccaggttgtcacccgacgctctcgctaccgtctgaacaaacgt
caggagcgcttgcacctggtcgagggattgctgatcgcgatgctcgatatcgatgaggtg
atccaactcattcggggcagcgatgatacggcgggcgcgcgcggccgcctgatcgatatt
ttcgaactcagcacgatccaggctgactacatcctcgaactccagttgcgacgtctcacc
aagttctcgcggatcgaactcgagaccgagcgcgacactctcgtgagtgaaatcgccgaa
ttggaggcgttactggccagccgagcccggcttgaggagctggtttcggacgaactcgac
caggttgctcagcgactcggcaccccgcggcggaccctgctcaccgaggcacgcccgtcg
gcggccagcaccggtcgcaaagctgcggctgtactcgagatcgccgacgtgccgtgccgg
gttctgctgagcactaccgatcggatagtacgctttgaccgcgacacgtcggccctcccg
cagccaaggcgcgtgtcgcgccgcagcaaacatgatgcgattctcagcatgctcgacacc
agtacgcgcaccgagattggcgcagtgaccaccgccgggcgtctgctgcgtttctcttct
gttgatgtcccggccgttccgtcctcctccgttcagctgggagcgggggtacgaatgaac
gactacctcccccatctggcgaaagacgagcgggtgctcgctctcgtcgccctcgatgac
tcgaggccgatcggcctgggcaccgtacgaggcatcgtgaagcgggtctttctctccgaa
ctccccagccgccccgacatcgagctgattgcgctcaaaccagaggacgctgtcattggt
gcagcacctgctgccgacgaggacgagctggtgtttgtgacgggagaggcgcagctgctg
cgtttctctgcctccgccgtgcgcccgcaaggacgaagtgccgcgggcatggcgggcgtg
aagctcggtgagacagacgaggcagtgcatttcgcggtggttgccgaccgggagcgtgac
gtcgtcgtcgccaccgtcgcgattgatagctgggcactttctgacactgacaccggcagc
gccaaggtatcggccttctccgagttccccgccaagggccgcgccaccagcggtgtacgc
gctcagcgtttccttaaaggcgagacagcgctccgggttgcctgggtgggccctgggccc
gcgcacgctctcgaagccgacggctcggttgcgacactgcctgagtccgggatgaaacgc
gatagctccggggtcgcgctctctaccccgatcgcgagtatcggtgccgctccggagctg
ttttaa
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