KEGG   Rathayibacter toxicus WAC3373: APU90_00260
Entry
APU90_00260       CDS       T04269                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rtc  Rathayibacter toxicus WAC3373
Pathway
rtc00010  Glycolysis / Gluconeogenesis
rtc00020  Citrate cycle (TCA cycle)
rtc00260  Glycine, serine and threonine metabolism
rtc00280  Valine, leucine and isoleucine degradation
rtc00310  Lysine degradation
rtc00380  Tryptophan metabolism
rtc00620  Pyruvate metabolism
rtc00630  Glyoxylate and dicarboxylate metabolism
rtc00640  Propanoate metabolism
rtc00670  One carbon pool by folate
rtc00785  Lipoic acid metabolism
rtc01100  Metabolic pathways
rtc01110  Biosynthesis of secondary metabolites
rtc01120  Microbial metabolism in diverse environments
rtc01200  Carbon metabolism
rtc01210  2-Oxocarboxylic acid metabolism
rtc01240  Biosynthesis of cofactors
Module
rtc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rtc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rtc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rtc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rtc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    APU90_00260
   00020 Citrate cycle (TCA cycle)
    APU90_00260
   00620 Pyruvate metabolism
    APU90_00260
   00630 Glyoxylate and dicarboxylate metabolism
    APU90_00260
   00640 Propanoate metabolism
    APU90_00260
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    APU90_00260
   00280 Valine, leucine and isoleucine degradation
    APU90_00260
   00310 Lysine degradation
    APU90_00260
   00380 Tryptophan metabolism
    APU90_00260
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    APU90_00260
   00670 One carbon pool by folate
    APU90_00260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtc04147]
    APU90_00260
Enzymes [BR:rtc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     APU90_00260
Exosome [BR:rtc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   APU90_00260
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like AlaDh_PNT_C FAD_oxidored GIDA FAD_binding_2 DAO 3HCDH_N 2-Hacid_dh_C NAD_binding_8 Amino_oxidase Lycopene_cycl Thi4
Other DBs
NCBI-ProteinID: ALS56421
UniProt: A0A0U1PR92
LinkDB
Position
55327..56745
AA seq 472 aa
MSEQRYDLVVLGGGSGGYAAALRATQLGLSVAIVERDKLGGTCLHRGCVPTKALLHAAEL
ADGARDASKYGVLASFDGIDFAGVTRYRESVVAGKYKGLQSLVSSRGITIVSGQGRLTSS
TAVEVGEQVLRGRSVVLATGSVSRTLPGVEIGGRIITSDQALELDRVPKHVVILGGGVIG
VEFASVWRSFGAEVTIIEALSRLVPNEDESVSKQLERAFRRRGIALSLDSRVASVSQSDV
GVTVSLDSGERVDAELLLVAVGRGPVTAGLGFEEVGVRLDHGYVVTNERLHTSVPGVYAV
GDVVAGPQLAHRGFQQGVFVAEEIVGLAPQVVTDAAVPKVTYCDPEVASIGLTEAHAIEQ
YGTDRVASYDYGLGGNARSTIIGTTGSVKVVRVIDGPVVGVHMVGSRVGELIGEAQLIVN
WEAHPEDIAPLVHAHPTQNEALGEAHLALAGKPLHAPGTTAKRQPAAPASVS
NT seq 1419 nt   +upstreamnt  +downstreamnt
gtgtcggaacagcgttacgacttagttgttctcggaggcggcagcggcggatatgccgct
gccctccgcgcgactcagcttggcctgagcgtagcgattgtcgagcgcgacaagctcggt
ggcacctgcttgcatcgcggctgcgtcccgacgaaggctctcctgcacgctgccgaactc
gccgacggcgctcgtgacgcgtccaaatacggcgttctcgcgagctttgacggcattgat
ttcgctggtgtcactcgctatcgcgagagcgtggtcgcaggcaagtacaaggggctgcag
agtcttgtgtcttcccgcggcatcaccattgtctccggccaggggcggctgaccagctcc
actgccgttgaggtgggcgaacaggttctgcgtggtcgctcagttgtcctcgccaccggc
tccgtctcccggacgctgccgggcgtcgaaatcggcggacggattatcactagcgaccaa
gcactcgaactagatcgggttccgaagcatgtcgtcatcctcggcggaggcgtgatcggc
gtggaattcgcaagcgtgtggcgctcgttcggggccgaggtgaccatcattgaagcactc
tcccgcctggtgccgaatgaggacgagagcgtcagtaagcaactcgagcgcgcatttcgg
cggcgcgggattgcgctctcgctggattcccgtgttgcctccgtctcacagagcgatgtc
ggtgtcaccgtttcgctcgacagcggcgaacgcgttgatgctgagctgctgctggtcgcg
gtagggcgcggacctgtcaccgccggtcttggtttcgaggaggttggcgtgcgtctcgac
cacggctatgtggtcacaaacgaacgcctacacacttcggtgcccggcgtctacgcagtc
ggtgacgtcgtcgccggaccgcagctcgcgcatcgcggctttcagcagggagtctttgtt
gcggaagagatcgtcggacttgcgccacaggtggtgaccgatgctgctgtgcccaaggtc
acttactgtgatcctgaggtcgcctcaatcggcctgaccgaagcgcacgccatcgaacag
tacggtactgatcgcgtcgccagctacgactacgggcttggcggcaacgcgcgaagcacg
atcatcggcacaaccggttcggtgaaggttgtccgtgttatcgacggtccggttgtcgga
gtacacatggtcggtagccgcgtgggtgagctgatcggagaggcgcaactcattgtgaac
tgggaggcgcatcccgaggacatcgccccgctcgttcacgcgcaccccacgcaaaacgag
gccctcggcgaggcgcatctcgccctcgccgggaagccgttgcacgccccaggaaccacc
gcgaagcggcaacccgccgctcccgcttcagtaagctga

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