Rathayibacter toxicus WAC3373: APU90_00675
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Entry
APU90_00675 CDS
T04269
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00061
Fatty acid biosynthesis
rtc00071
Fatty acid degradation
rtc01100
Metabolic pathways
rtc01212
Fatty acid metabolism
rtc02024
Quorum sensing
rtc04146
Peroxisome
Module
rtc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
APU90_00675
00071 Fatty acid degradation
APU90_00675
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
APU90_00675
09145 Cellular community - prokaryotes
02024 Quorum sensing
APU90_00675
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtc01004
]
APU90_00675
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtc04147
]
APU90_00675
Enzymes [BR:
rtc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
APU90_00675
Lipid biosynthesis proteins [BR:
rtc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
APU90_00675
Exosome [BR:
rtc04147
]
Exosomal proteins
Exosomal proteins of breast milk
APU90_00675
Exosomal proteins of breast cancer cells
APU90_00675
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6907
Motif
Other DBs
NCBI-ProteinID:
ALS56488
UniProt:
A0A0C5BEY9
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All DBs
Position
143579..145264
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AA seq
561 aa
AA seq
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MSIHSPRPWLRSYAPGVPTELTLPSGSLIDIITESARLYPHQVALEFFGRSTSYRQLADE
IEKAAEGLRRLGVRSGDPVALILPNCPQHVVAFYAILRLGAVVVEHNPRYTPRELRHQFE
DHGARIAIAWDRVVPTVQDLPEDVGVTTVIAVDLTRALPTGLRVALRLPLPRSRRFRAAL
TGPERGAVRWESLLRHRLSPAQPRPTAEDLAVIQYTSGTSSTPKGAELTHANLTANAAQA
RAWIPQVNRGHCVVYAVLPMFHAYGLTLCLTFAISMGARLVLFPTFDPDLVLKAMRKHPA
TFLPAVPPIAERLVSRARERGISLKGIEIAISGAMPLDTALVASFEAQTSGMLVEGYGLS
ETSPIVTANPAGATRRAGTVGLPLPGTDVRIVDPDAPENERAPGEQGELVVRGPQVFRGY
HGKPDETAASFTTDGWFRTGDIASLDDDGFVRIVDRLKELIITGGFNVSPSEIEEVLRGL
PGIREAAVVGLPDAHSGESIVAAVVLEPGAHFDQEAARSMARDKLTAYKVPQRIVVVDEL
PLNMMGKVLRRKVAALLLDQN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattcactcgccccgcccctggctccgcagctatgcacccggcgtgccgacagag
ctcaccctgccctccggatcgctgatcgacatcatcacggaatccgctcggctctaccca
caccaagtcgccctcgaattcttcggccgctcgaccagctaccgtcagctggcggacgag
atcgagaaagctgcggaagggttacgccgactcggagtgcgctcaggcgatcctgttgcc
ctgatcctccccaattgcccacagcatgtcgtggcgttctacgccattttgaggctgggc
gcagtggtggtggagcacaatccgcgctacacaccgcgggagctccgccaccagttcgag
gaccacggcgcgcgaatcgccatcgcctgggatcgcgtggttcccaccgtgcaggatctg
ccggaagatgtgggcgtcaccaccgtgatcgcagttgacctcacgcgggcactgcccaca
ggtctccgcgttgccctgcgccttccgctacctcggtcacgccgcttccgcgccgccctc
accgggccagagcgcggagccgtcaggtgggagtcgctgctacgccatcgtctcagccct
gcgcagccgcggccgaccgcggaagatctcgccgtgatccagtacacgagcggcaccagc
agcacacccaaaggcgccgaactcacgcacgccaacctcaccgctaatgcggcacaggca
cgagcctggatcccccaagtgaaccgcggtcactgcgtcgtctacgcagtactgccgatg
ttccacgcctatggcctgacactctgtctcaccttcgccatcagcatgggtgcacggctc
gtactgttcccgacgttcgatccggacctggtgctgaaagccatgcgcaagcatccggcg
acgtttttgcccgcggtaccgcccatcgccgaacgactggtatcgcgagctcgggaacgc
ggcatttcgctgaaaggcatcgagatcgcgatttccggagcgatgcccttggataccgcc
ctggttgcctccttcgaagcccagaccagcgggatgctcgtcgagggatacgggctctca
gaaacctcgccgatcgtgacagctaacccggcaggggcaacccgccgcgccggaaccgtc
gggctaccgctgccgggcaccgacgtgcggattgtcgatcccgacgcacccgaaaatgag
agggcaccgggcgaacagggtgaactcgtggtgcgaggcccgcaagtgttccgcggctat
cacggcaaaccagacgagacagcggccagcttcacgaccgacggctggttccggaccggc
gatatcgcgtccctcgatgacgatggctttgtccggattgtcgatcggctgaaggagctc
atcatcaccggcggctttaacgtctcaccctccgaaatcgaggaggtgctgcgcggcctg
cccgggatacgggaagccgcggtggtggggctgccggacgcccacagcggcgagtcaatt
gtggcggcggtcgtccttgaaccgggagcgcacttcgaccaggaggcggcgcgctcgatg
gcacgtgacaagctgaccgcgtacaaagtgccgcagcgaatcgtcgttgtcgatgagctg
ccactgaacatgatgggcaaagtcctgcgacgaaaggttgccgcgctgctgctagaccag
aactaa
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