KEGG   Rathayibacter toxicus WAC3373: APU90_00895
Entry
APU90_00895       CDS       T04269                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rtc  Rathayibacter toxicus WAC3373
Pathway
rtc02024  Quorum sensing
rtc03060  Protein export
rtc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rtc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    APU90_00895
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    APU90_00895
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APU90_00895
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rtc02044]
    APU90_00895
Enzymes [BR:rtc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     APU90_00895
Secretion system [BR:rtc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   APU90_00895
  Eukaryotic Sec-SRP protein
   APU90_00895
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_24 AAA_22 cobW AAA_31 MMR_HSR1 Zeta_toxin AAA_30 AAA_16 nSTAND3 APS_kinase AAA_33 6PF2K AAA_18 TsaE GTP_EFTU MeaB ABC_tran
Other DBs
NCBI-ProteinID: ALS56524
UniProt: A0A0C5B9R4
LinkDB
Position
complement(188218..189768)
AA seq 516 aa
MATFGTLSDRLLETFTNLRTKGKLSASDVEGTVREIRRALLDADVALEVVKDFTGKVRER
ALSDEVNRALNPAQQVVQIVNEELIEILGGQSRRLEFAKRPPTVIMLVGLQGAGKTTLAG
KLGKYLGKDGHTPLLVAADLQRPNAVQQLQVVAEQVGAAVFAPEPGNGVGNPVTVAQNAI
RFAQDKQYDTVIIDTAGRLGVDADMMKQAADIRRVTNPDEVLFVIDAMIGQDAVATAKAF
QAGVDFTGVVLSKLDSDTRGGAALSVVSLTGRPILFASTGESLDDFEPFHPDRMASRILD
LGDVLTLIEQAQAAFDEDEARKVAEKIISDSFTLEDFLSQMQQLRNMGSIKKMIGMLPGA
KGMREQLDQFDEREIVRTEAIIQSMTQAERRNPKLLNGSRRLRIARGSGMTVTDVNQLVQ
RFEQAAKMMKTVAKGGMPTVPGRGPMPGAGYQGRPKPVKKKSSKSGNPAKRAAENATLMA
PRASDASGSGFGLGGGTSGAQPSAEELEKLHKLLDR
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggctactttcggcaccctctccgatcgactccttgagaccttcacgaatctccggacg
aaaggcaagctctctgcctcggatgtcgagggcacggtccgtgagattcggcgagcactg
cttgacgccgatgtcgcgctggaggttgtcaaagacttcactggcaaggtgcgcgagcgt
gctctcagtgacgaggttaatcgggcgctgaatccggcgcagcaggtcgtccagatcgtc
aatgaagaactgattgagatcctcggtgggcagtcgcgtcgcctcgagttcgccaagcgg
ccaccgacggtcatcatgctggtgggcctccagggtgcgggtaagacaactcttgccggg
aagctcggtaagtatctcggcaaggatggtcacactccgctgcttgtcgcggccgacctt
cagcgccccaacgctgtgcagcagttacaggtggttgccgagcaggtcggcgccgccgtt
tttgctcctgagccgggcaacggtgtcggcaatccggtcacggtcgcgcagaacgcgatt
cgtttcgcccaggacaagcagtacgacaccgtcatcatcgatacagccggtcgcctgggt
gttgacgctgacatgatgaagcaggccgccgacatccgccgcgtcacgaatcccgacgag
gtgcttttcgtcatcgacgcgatgatcggtcaggatgcggtcgcgaccgcgaaggctttc
caggcgggagtcgatttcaccggtgtcgtgctgtccaagcttgacagtgacactcgcgga
ggcgcggcgctatcggtcgtgtcgctcaccgggcgtcccattctctttgcctcgacgggg
gagtcgcttgatgactttgagccgttccaccccgatcgcatggcaagtcgcatcctcgac
ctcggtgatgtgctcactcttatcgagcaggcgcaagccgccttcgatgaagacgaggcg
cgcaaagttgccgagaaaatcatcagcgactcgttcacgctcgaggacttcctcagccag
atgcagcagctgcgaaatatgggctcgattaagaagatgatcggtatgctccctggtgct
aaagggatgcgcgagcagctggaccagttcgacgagcgtgagattgtgcgcaccgaggcc
atcatccagtcgatgacccaggctgaacgccggaacccgaaactacttaacggttctcgt
cggctccgtattgcgcgtggttccggtatgaccgtcaccgatgtcaatcagctcgtgcag
cgtttcgagcaggcggcgaagatgatgaagacggtagccaagggtggaatgccgacagtt
cccggacgagggccgatgcccggagctggttatcagggtcgtcccaaaccggtcaagaaa
aagagttcgaagtcgggcaatccggccaagcgggccgccgagaatgcgacgctcatggct
ccgcgagcctccgatgcctccggctcgggtttcggtctgggtggcgggacatcgggtgcg
cagcccagtgctgaggagcttgagaagctgcacaaacttctcgaccggtag

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