Rathayibacter toxicus WAC3373: APU90_01480
Help
Entry
APU90_01480 CDS
T04269
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00470
D-Amino acid metabolism
rtc00550
Peptidoglycan biosynthesis
rtc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APU90_01480 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APU90_01480 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtc01011
]
APU90_01480 (murD)
Enzymes [BR:
rtc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
APU90_01480 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rtc01011
]
Precursor biosynthesis
Amino acid ligase
APU90_01480 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox_2
F420_oxidored
Pyr_redox
3HCDH_N
2-Hacid_dh_C
ThiF
Motif
Other DBs
NCBI-ProteinID:
ALS56616
LinkDB
All DBs
Position
complement(320172..321731)
Genome browser
AA seq
519 aa
AA seq
DB search
MALAGMIDPALTPRLDGLRSWHSDWRGLRVAVLGLGVTGFSAADTLAELGSDVLVLADRA
DEQRERMLAVIGARLHRTEHLDSVPHELSSFAPDLMIVSPGFRPTHPIIRWAQEAGIALW
GDIELAWRLRDKVVRADGSPADWLVVTGTNGKTTTVQMTAAMLVAGGLRAAPCGNIGIPV
LDAVRDPQGFDVLVVELSSYQLHYLGAIEPLASTCLNIADDHLDWHSSFEKYRAAKGKVY
AGTRFACIYNRADALTEQMVVDADVREGARAIGFGLDVPGPSGFGVVDGILCDRAFLEDR
RTTALELVTVAELAERQLAAPHIVQNVLAAAALSRACGVDPRAIRRALATFELDAHRVQL
VAEKSGVTWVDDSKATNPHAANASLRAYPSVVWLVGGVLKGVDVDALVASHVGRLRGVVV
IGAERTALLEAFRRHAPAVPVREVIPDDTGAVMQVAVEAAAALAREGDVVLLAPAAASMD
QFLDYAARGRSFAVAVATYLQGGADDRSDNEPPGGRPAH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgctggaatgatcgatcctgcacttaccccccggcttgacgggcttcgcagc
tggcattccgactggcggggccttcgagtcgcggttctgggcttaggtgtgaccgggttc
tcggctgccgacacgcttgctgagctgggctctgacgtgctcgtgctcgccgatcgggct
gatgagcaacgcgagcgaatgctggcggtgatcggagcacgtctccatcgcactgaacac
ctcgattccgttccccacgagctatccagctttgcccccgatcttatgatcgtttcgccg
ggttttcgccccacgcatccgattattcggtgggcacaggaagcgggcattgctctctgg
ggcgatatcgaactcgcctggcgtctgcgggataaagttgtgcgtgctgacggttcaccc
gccgactggctggtggtgacaggcaccaacggtaagacgacaaccgtgcaaatgaccgcg
gcgatgctggtcgccggaggcttacgggctgccccctgcgggaacatcgggattccggtg
ctcgacgccgtccgcgatccgcagggtttcgacgttcttgtggttgaactctcgagctat
caattgcactacctcggcgcgatcgagccgctcgcgagcacctgcctcaatatcgctgac
gatcatctggattggcacagttccttcgaaaagtatcgcgccgccaaaggcaaggtctat
gccggaactcgctttgcatgcatctataaccgcgctgatgcgctcacggagcagatggtc
gtggacgccgacgtgagggagggtgcacgcgccatcggtttcggcctggatgtacccggt
ccgagcggattcggtgttgtcgacgggatcctctgcgaccgtgcttttctcgaggaccgc
cgcaccactgcgctcgaacttgtcaccgttgctgaactcgccgagcgtcagcttgctgcg
ccgcatatcgtacaaaatgtgcttgctgccgccgctctctcgcgggcctgcggggttgac
ccacgtgcgattcgtcgcgccctcgccaccttcgagttggatgctcaccgcgtccagctc
gtggcagaaaaatctggagtgacctgggttgacgattccaaggcgacgaatccgcatgca
gccaacgcttcactgcgcgcttacccttctgtcgtatggcttgtcggcggtgtgctcaag
ggggtcgatgtcgatgcgcttgtggcttcacacgttggacggctccgtggtgtcgtggtg
attggtgctgaacggacggcattgttggaggcattccggcgacacgcgcccgcggttccc
gttcgtgaggtgatcccggatgacactggtgcggtgatgcaggtggctgtcgaggccgca
gcagcgttagcccgcgaaggcgatgttgttctgctcgcacctgccgcggcgtcgatggac
cagttcctcgattacgcggctcgaggccgctctttcgcggtagccgtggcgacatatcta
caaggaggagcagatgaccgctccgacaacgagccgcccggcggccgacctgcgcactga
DBGET
integrated database retrieval system
