Rathayibacter toxicus WAC3373: APU90_01555
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Entry
APU90_01555 CDS
T04269
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00061
Fatty acid biosynthesis
rtc00071
Fatty acid degradation
rtc01100
Metabolic pathways
rtc01212
Fatty acid metabolism
rtc02024
Quorum sensing
rtc04146
Peroxisome
Module
rtc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
APU90_01555
00071 Fatty acid degradation
APU90_01555
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
APU90_01555
09145 Cellular community - prokaryotes
02024 Quorum sensing
APU90_01555
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtc01004
]
APU90_01555
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtc04147
]
APU90_01555
Enzymes [BR:
rtc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
APU90_01555
Lipid biosynthesis proteins [BR:
rtc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
APU90_01555
Exosome [BR:
rtc04147
]
Exosomal proteins
Exosomal proteins of breast milk
APU90_01555
Exosomal proteins of breast cancer cells
APU90_01555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ALS56629
UniProt:
A0A0C5BGY7
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All DBs
Position
337620..339443
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AA seq
607 aa
AA seq
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MDHSDSPLAVTADPQANTTALLLNRVRETPDRPLFAVPTGSGWRDVTAREFLDQVIALAK
GFVAAGIEPSEKIGLVCATRYEWTLIDFAVWFAGGVLVPVYETSSPAQIQWNLVDSGATA
VIMETPEQFARFDEVRAELPDVRDAWQIGLGDLDKLVARGTDVSDDEIERRRSLATGSDI
ATIIYTSGSTGQPKGCVIQHANFVELTRNAAVALTTVIHEPGASILLFITTSHVFARFIS
ILCVHGGVKVGHQANIKKLLPALASFKPTFLLAVPGVFEKVYNSAEQKAEAHGRGKIFRR
AADVAVAHSRAVQAGSVPFILHLQFLLFNRLIYSKLRAAMGGRVRYAVSGSAPLGERLGH
FFHSLGITILEGYGLTETTAPVTVNRAEHFVIGTVGTALPGVSVRIAADGEIQVRGINVF
GGYWNNEQATAEAFNGDWFRTGDLGTLDDDGFVRITGRTKEIIVTAGGKNVAPAALEDPL
RANPLIGQAVVVGDQRPFIAALITLDSEMLPTWLDNNGQDPSLSLAEAVNNPAVLAEVQR
AVTAANERVSRAESIRKFVILPTEFTEASGHLTPKLSIKRTAVLADFADAISALYWRDPL
TEGISLY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggatcactctgactccccgctcgcggtaaccgccgacccacaggcgaataccactgcc
ctgctgcttaaccgagtacgcgagactcctgaccggccactcttcgctgtgcctacaggc
tccggctggcgcgacgtcacggcacgtgaattcctcgaccaggtcatcgcgctcgcgaag
ggttttgttgcagccggaatcgagccgagtgaaaaaatcggattggtgtgcgcgacccgc
tatgagtggacgctgattgacttcgcggtctggttcgcaggcggagtcctcgtgccggtg
tatgaaacctcttctccggcgcagatacagtggaacctcgtcgactccggcgcgacggcg
gtgatcatggaaacccccgaacagttcgcccgttttgatgaggtacgtgctgagctaccc
gatgttcgcgacgcctggcagatcggcctcggtgacctcgataagctcgtcgcccgagga
accgacgtctccgacgacgagatcgagcgtcgccgatcactcgctaccgggtctgacatc
gccaccattatttacacctccggttcaaccgggcagccgaagggctgcgtcatccaacac
gccaacttcgtcgagctgacccggaatgccgcagtcgcgctgaccacggtgattcacgaa
ccgggggcatcgatactgctattcatcaccacctcgcacgtctttgcacgctttatctcc
attctttgcgtgcacggcggcgtcaaagtggggcaccaggccaacataaaaaaattgttg
cccgctctcgcctcattcaagccgacattcttactagcagtaccaggagtgtttgaaaag
gtctacaactcggccgagcaaaaggcagaagcacacgggagaggaaagatttttcgccgg
gcagctgacgtcgcggtcgcgcattctcgtgccgtccaggcaggttcggtaccctttatt
ctgcatctgcaattcctactttttaaccgactcatctactcgaaactgcgggctgccatg
ggaggcagagtccgctatgcggtatcgggatcagcgccattgggcgaacggctcggacat
tttttccatagcctcggcatcacgatccttgaaggctacggactcacggagaccactgct
ccagtaaccgtcaaccgcgccgaacatttcgtaataggcactgtcggcactgcccttccc
ggggtatcggttcgcattgccgccgatggtgagatccaggtgcgcggtatcaatgtcttc
ggcggctattggaataacgaacaggcaacagcggaggctttcaacggcgactggttccgg
accggcgatctcggaacgctcgacgacgacggtttcgtccgtatcacgggacgcacgaaa
gaaattattgtcaccgccggcgggaagaatgtcgcgcccgcagccctggaggatccgctg
cgcgcaaatccgttgatcgggcaggcggttgttgtcggtgatcagcggcccttcatcgcg
gcactcatcacgctagatagcgagatgctgcccacctggctcgacaataacggtcaggac
ccctccctctcccttgcggaagcggtgaacaatccggccgtcttggcggaggtgcagcgc
gccgtcaccgcggccaatgagcgcgtttcgcgagcggagtcgatccgcaagttcgtcatt
ttgcccaccgagttcacagaggcgagcggtcacctcactccgaagctgagcatcaagcgc
accgccgtgctcgccgactttgccgatgccatttcggcgctctactggagagatcccctc
actgaggggatcagtctttactaa
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