Rathayibacter toxicus WAC3373: APU90_01980
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Entry
APU90_01980 CDS
T04269
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rtc
Rathayibacter toxicus WAC3373
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtc03016
]
APU90_01980
Enzymes [BR:
rtc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
APU90_01980
Transfer RNA biogenesis [BR:
rtc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
APU90_01980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ALS56697
UniProt:
A0A0C5BDT2
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All DBs
Position
complement(432098..433630)
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AA seq
510 aa
AA seq
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MSKPGPVPLPTVSSRPRTYEVRTFGCQMNVHDSERLSGSLEAAGYVPADGIEPDVVVINT
CAVRENADNKLYGNLGYLASVKRRHRGMQIAVGGCLAQKDKNVILDRAPWVDVVFGTHNM
GAVPRLLERARHNQEAQLEILESLEVFPSTLPTKRDSTYSGWVSISVGCNNTCTFCIVPS
LRGKEKDRRPGDILAEIQALVDDGVIEVTLLGQNVNSYGVEFGDRYAFSKLLRTAGSLEG
LERLRFTSPHPAAFTDDVIDAMAETPAVMPQLHMPLQSGSDRILRAMRRSYRSEKFLGIL
DRVRARVPHAAITTDIIVGFPGETEEDFAETLRVVEEACFASAFTFQYSIRPGTPAATLP
SQIPKAVVQERYERLVALQDAISERENLALVGREVEVLVATNEGRRDSQTQRLSGRAEDN
RLVHFDVPTGSARPRPGDVVSVVVTKAAPFYLIADSMNAAPLRIRPTRAGDAWDRSQAQS
CGTTSDSQRVALGLPSLRVSATTKTTPSRP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcccggccctgtcccattgcccaccgtcagcagtcggccacggacctacgag
gtgcgaactttcggctgtcaaatgaacgtgcatgactccgagcgcctcagcggttcactc
gaggcggccggctatgtccccgctgacggcattgagcccgacgtcgtggtaatcaacacg
tgcgcagttcgcgagaatgccgataacaagctgtatggaaacctgggttatctcgcttcg
gtcaagcggcggcacaggggcatgcagattgcggtcggtggttgtcttgcgcaaaaagac
aagaacgtcatccttgatcgggcaccgtgggtcgatgtcgtctttgggacccacaatatg
ggtgccgtgccgcgcctgctcgagcgagctcggcacaaccaggaggcgcaacttgaaatc
ctcgagtctcttgaggttttcccctcgacccttccgaccaagcgcgactccacctacagc
ggctgggtgtcgatttcggttggatgcaataacacctgcactttttgcattgttccgtct
ttgcgtggcaaagaaaaggaccgtcggccgggcgacattcttgccgagattcaggcactg
gtcgacgatggcgtgatcgaggtcactctcctcgggcaaaacgtgaattcgtacggtgtc
gaattcggtgaccgttacgcgttctcgaaacttttgcgcactgcagggtctcttgagggg
ctggaacgcctccgctttacaagcccgcatcctgcggccttcaccgatgacgtcatcgac
gcaatggccgagactcccgcggtgatgccgcagttgcacatgccgctccagtccggctcc
gatcgcattctgcgggcgatgcgtcggtcctaccgctccgaaaagtttttggggattctg
gatcgggtgcgggcacgcgttccgcacgccgcgatcaccaccgacatcatcgtgggtttt
cccggagagaccgaggaggattttgccgaaacgttgcgagtggtcgaggaggcgtgcttc
gcgtccgccttcaccttccagtactcgatccgcccaggaacacccgcggcaacactcccg
agtcagatccccaaggcggtcgttcaggaacgttacgagcgacttgttgccctgcaagat
gccatcagcgagcgcgaaaatcttgcgctggtcggtcgcgaagtcgaggttcttgtggcc
acgaatgagggccgccgcgatagccagacgcagcgtctcagcggtcgagccgaggataac
cgtctcgtgcactttgacgtgccgaccggctcagcgcgaccgcgtccgggcgacgttgtc
tcggtggtggtcaccaaggcagcccctttctacctgatcgccgactcgatgaatgctgcg
ccgctgcgcattcgtcctacccgggcgggcgacgcgtgggaccgctcgcaggcgcagtcg
tgtggcaccacctccgactcgcagcgtgtcgcgctaggactgccgtcattgcgggtcagc
gcgacgacaaaaacgactccgagccgcccatga
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