Rathayibacter toxicus WAC3373: APU90_02185
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Entry
APU90_02185 CDS
T04269
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
rtc
Rathayibacter toxicus WAC3373
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtc03021
]
APU90_02185
Transcription machinery [BR:
rtc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APU90_02185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
Phage_CII
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ALS56731
UniProt:
A0A0U1PV78
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All DBs
Position
478868..479767
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AA seq
299 aa
AA seq
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MRTIEISTEQATTDTAHDEKDAHTLSLFHKAAAAESAESNRIRERIVLDHLGLAEAMARR
VSHGGGAAGSNHPGGDWADLRQVAYLGLIKASRRFTPERGASFAAFAVPTIIGELKRHLR
DLGWMIRPPRGLQELHRRCTAAAEELTQELRRRPSELEIARRLGVEAPEVAEALSLGHPL
SLDEPISATGTRLVDTLGGDDDERLLEIDRRYGLADALAELEEGERELLRLRFVEERTQK
HIADALGTTQMQISRLQRRILAQLAVRLGSPAHHPQPGTPRARVVAVTPVGSTDRLRSA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgatcgagatcagcacagagcaggccacgaccgacacagcccacgacgagaaa
gatgcacacacgctttctctcttccacaaagcggccgccgccgagagcgccgaaagcaat
cggatccgggaacgcattgtgctcgaccacctcggtctggccgaagccatggcccgtcgt
gtctcccacggaggcggtgccgcggggagcaaccatccgggaggtgactgggccgatctg
cgccaggtcgcctacctggggctgatcaaagcatcccgacgttttactcccgagcgcggt
gcgagcttcgctgcattcgcggtgcctaccattatcggcgaactcaaacggcacctgcgt
gacctgggctggatgatccgtccgccacgcggtctacaggagttgcaccgtcgctgtact
gccgccgcagaggaacttacgcaggaactccgccgccgacccagcgaactcgagatcgcg
cggcgactcggcgtcgaggcaccggaggttgccgaggcgctttccctcgggcaccccctc
tctcttgacgaaccgatcagcgcgaccgggacgcggctggtcgacactctaggcggcgat
gacgacgagcgtctcctcgagatcgatcgccgatacgggctcgctgacgcgctggccgag
ctagaggagggagagcgcgagctgctccggctgcgttttgtcgaggagcggacgcaaaag
cacattgccgacgcactcgggacaacacagatgcagatctcacgactacagcggagaatc
ctcgcacagctcgccgttcggctgggctcccccgcgcatcaccctcaaccgggcactcct
cgagcccgcgttgtcgctgtcactcctgtcggctcaactgaccggctgcggtccgcctaa
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