Rathayibacter toxicus WAC3373: APU90_03335
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Entry
APU90_03335 CDS
T04269
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00260
Glycine, serine and threonine metabolism
rtc00460
Cyanoamino acid metabolism
rtc00630
Glyoxylate and dicarboxylate metabolism
rtc00670
One carbon pool by folate
rtc00680
Methane metabolism
rtc01100
Metabolic pathways
rtc01110
Biosynthesis of secondary metabolites
rtc01120
Microbial metabolism in diverse environments
rtc01200
Carbon metabolism
rtc01230
Biosynthesis of amino acids
rtc01240
Biosynthesis of cofactors
rtc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APU90_03335
09102 Energy metabolism
00680 Methane metabolism
APU90_03335
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
APU90_03335
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
APU90_03335
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
APU90_03335
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
APU90_03335
Enzymes [BR:
rtc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
APU90_03335
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
ALS56918
UniProt:
A0A0C5BDD0
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Position
complement(727186..728493)
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AA seq
435 aa
AA seq
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MSSFSVPSSLSPESRVATSFDQPVSVVDPEISAVLQQELDRQRGYLEMIASENFVPRAIL
DSQGSVLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKALFGAEFANVQPHSGASANAA
VLAAMIQPGDTILGLELAHGGHLTHGMKLNFSGKLYNATAYGVDPQTFRIDMDAVREKAL
DVRPRVLIAGWSAYPRHLDFEAFRAIADEVGAKLWVDMAHFAGLVAAGLHPSPVPYADVV
TSTVHKTLAGPRSGLILAKKEYAKKLNSAVFPGQQGGPLMHVIAAKATAFKLAGETEFAD
RQERTIRGAQILAERLTAADSQAEGIDVLTGGTDVHLVLADLRNSPLNGQQAEDRLHEVG
ITVNRNAVPFDPRPPMVTSGLRIGTPALATRGFGDAEFAEVADIIADALKPSSGVESLRA
RVGRLTDNFPLYPGL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttctttttccgtcccgagttctctctcgcccgagtcgcgcgttgcgacgtctttc
gatcagcctgtctcggtcgtcgatcccgaaatctctgccgtgctccagcaggaactggac
cgtcagcgcggctatctcgagatgatcgcgagcgagaactttgtgccgcgcgcgatcctt
gattcacaaggctccgtcctgaccaataaatatgccgagggttaccctggtcgtcgttac
tacggtggttgtgagttcgtcgacgttgctgagcagcttgccatcgaccgcgcgaaagcg
ctcttcggtgccgagtttgccaatgtgcagccccactctggtgcgagtgcgaatgcggcg
gtgcttgccgcaatgatccaacccggtgacaccatcctcggcctcgagctcgctcacggc
ggtcacctgacccacgggatgaagctgaacttctcgggcaagctctacaacgccaccgcc
tacggtgtcgacccgcagaccttccgcatagatatggacgcggtgcgcgagaaggccctc
gacgtccgcccgcgggtcctcatcgctggctggtcggcctacccgcgccaccttgatttt
gaggcgttccgtgcgatcgccgacgaggtgggtgcgaagctctgggttgacatggcccac
tttgctggcctcgtcgcggccgggctgcacccttcgccggtgccgtatgccgatgttgtc
acctcgaccgtgcacaagacgcttgccggtccccgctctggcctcatcctggccaagaag
gagtacgcgaagaagctcaattcggccgtttttcccggtcagcaaggtgggcctctcatg
catgtgattgctgcgaaggcgaccgcgttcaagctcgcgggtgagaccgagtttgccgac
cgccaagagagaaccatccgcggcgcgcagattctggccgagcgtcttaccgcggctgac
tctcaggctgagggtatcgatgtgctcaccggtggtactgacgtgcatctggtgctcgcg
gacctacggaactcgccgctgaacggccaacaagccgaggaccgcctccatgaggttggt
atcaccgtcaaccgcaatgccgtgccgttcgatccacgcccgcccatggtgacctctggg
ttgcgcatcggcacacccgcgctcgcaacacgcggatttggcgacgccgagttcgctgag
gtcgcggacatcatcgccgacgcgttgaagccgtcctccggtgtcgagtcacttcgtgct
cgcgtcggtcggctcaccgacaactttccgctttacccgggtctttag
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