Rathayibacter toxicus WAC3373: APU90_04020
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Entry
APU90_04020 CDS
T04269
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
APU90_04020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtc01007
]
APU90_04020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtc03016
]
APU90_04020
Enzymes [BR:
rtc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
APU90_04020
Amino acid related enzymes [BR:
rtc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
APU90_04020
Transfer RNA biogenesis [BR:
rtc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
APU90_04020
Prokaryotic type
APU90_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ALS58256
UniProt:
A0A0C5BBK3
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All DBs
Position
complement(867555..868826)
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AA seq
423 aa
AA seq
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MIDPVLLRENPDDVKRSQEARGDSVRLVDEALEADRVRRAAITEAERLRAEQNAFGKKVA
SASRDEKTTFVAEAQRLAADVRAAQQAAAEANEQFTALLKRLANPIIDGVPTGGEDNFAL
LRTVGERPVFDFVPRDHLEIGELLDGIDMQRGAKVSGARFYFLKGVVARLEIALMNLGLD
RALAAGFTPLITPTLVRSQIMEGTGFLGEHSDEVYHLPADDLYLTGTSEVALAGYHADEI
LDLSGGAKRYAGWSSCYRREAGSGGRDTRGIIRVHQFNKLEMFVYALPDQAEAEHERLLS
YQEEMLRILGLHYRVIDVAAGDLGQSAARKFDVEAWIPTQEAYRELTSTSNCTTFQARRL
STRYRTDSGKTAPVATLNGTLATTRWIVALLETHQLADGSVRVPDAVQPYLGGLEVLTPP
RDA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatcctgtacttctgcgcgagaacccggacgacgtgaagcgctcgcaggaggcg
cgcggcgactctgtccgtcttgtcgacgaggctttggaagccgatcgagtccgccgtgcc
gcgatcaccgaagcggagcgattgcgcgccgagcaaaacgccttcggtaagaaggttgcc
tcggcatcacgtgacgagaaaactacttttgtcgcggaagcacaacggctcgcagcagat
gttcgcgcggcgcagcaggctgcagcggaggctaatgagcagtttaccgcgctgcttaag
cgcctcgccaatccgatcatcgacggtgtccctactggaggcgaagacaacttcgcactt
cttcgcactgttggtgagcgtccggtcttcgatttcgtcccgcgtgaccacctcgagatc
ggcgagcttctcgacggcatcgacatgcagcggggagccaaggtcagtggcgcacgcttc
tattttcttaagggagtcgtagcccgcttagagatcgcgctgatgaacctcggtcttgac
cgggctttggcggctggctttactccactgattacgcccaccctggtccgttcgcaaatt
atggagggcaccggattcctgggcgaacacagcgacgaggtttaccacctgcctgccgat
gatctctacctgaccggcaccagcgaggtggcgctcgccggttaccacgctgacgagatc
ctcgatctctcgggtggggccaagcgttatgccgggtggagcagctgttaccgtcgcgaa
gctggctctggcgggcgtgatacccgcggcattattcgggtgcaccagttcaacaaactc
gaaatgtttgtctatgcccttcctgaccaggcggaagcggaacacgagcgcctcctctca
tatcaggaggagatgctgcgcatcctcggcctgcactaccgcgtcattgacgtcgctgcc
ggagacctcggccagagcgccgcccgcaagttcgacgtcgaggcctggataccgacgcag
gaggcttaccgtgaactgacctctacctcgaactgcaccaccttccaggcccgtcgcctc
agcactcgctaccgcaccgactccggtaaaactgccccggtcgcgaccctcaacggcacc
ctcgctactactcgctggatcgtcgccctgctcgagacgcatcagttggccgacggttct
gtgcgggtgccagatgcagtgcagccctatctcggcggcctggaggttctcacgccgccc
cgcgacgcatga
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