Rathayibacter toxicus WAC3373: APU90_04720
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Entry
APU90_04720 CDS
T04269
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rtc
Rathayibacter toxicus WAC3373
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_04720
Enzymes [BR:
rtc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
APU90_04720
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
APU90_04720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALS57154
UniProt:
A0A0C5B8G6
LinkDB
All DBs
Position
complement(1016907..1018376)
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AA seq
489 aa
AA seq
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MNTHTRWIVSGQLGPDFDDGGPMLLVEAREAFGRRPMHRAKAHLLLSALRHRAEELGDRV
DYRRAESFAAAFKGRDDLEVIDPPTRGARRFARRRGMRILPSRGFITQEKDFHEWVLTRS
GKRLLLEDFYRWSRERTGVLMRGDQPEGGHWNFDRDNRQPPPRGATRLGLSEPRWPQEDE
IDEEVRVDLARWEAEGAIRLVGADGPRRFAVTASEAEAALADFISSRLSDFGPYEDAMLS
GDWTMAHSLLSVPLNLGLLDPRAVIAAVEAEYAAQRVPLSSAEGFIRQILGWRDYVWNLY
WFLGPDYRGRSRAGGSTVPIPPAVLSLDSTEIEANCLREALDGVRRHGWAHHSQRLMVLG
NWALQRGWDPNQLTDWFVDVFVDGTEWVMPANVIGMSQYADGGIVATKPYVSGGAYINRM
SDYCRGCRFTPTVRLGEKACPVTAGYWAFLDRAEPLLRGNHRMAQPLAGLRSLVDREAVV
DQERRRESW
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcacactcgctggatcgtcagtggccaacttggccccgatttcgacgatggc
ggcccgatgctcctcgtggaggcccgggaggctttcggccgtcgtccgatgcaccgtgca
aaagcccaccttcttctctccgcgttgcgacaccgcgcagaggagctcggcgatcgggtc
gactaccgtcgcgccgagagcttcgccgcggcgtttaaaggacgtgacgatctggaggtg
attgacccgccgacccgcggcgcccgccgctttgcccgccgtcgtggaatgagaattctc
cccagccgcggtttcatcacccaggagaaagattttcatgagtgggtgttgacgcggtcg
gggaaacgactgctcctcgaggacttttatcgctggagtcgggagcgcacgggcgtcctg
atgcgtggcgaccagcccgaaggtggccactggaacttcgatcgcgacaaccgtcagcca
ccaccccgcggcgccacccgtctcggcctatccgagccgcggtggccccaggaagacgag
atcgacgaggaggtgcgcgtcgatcttgcccgctgggaagcggagggtgcgattcggctt
gtcggcgccgacggcccgcgtcgcttcgctgtgacggcgagcgaggcggaggcagcgctc
gccgatttcatctcgtcgcgcttgtcggacttcggaccttacgaggacgccatgctttct
ggtgactggacgatggcccactcgttactgagtgttccgctgaacttgggtctgctcgat
cctcgtgccgtaattgcagcggtggaggccgaatatgctgcgcagcgggtgccgttgtcg
agtgccgaaggctttattcgacagatcctgggttggcgtgactacgtgtggaatctttac
tggttcctcgggcccgattatcggggtcgaagccgcgcaggaggttccactgtcccgatt
cctccggccgtgcttagtctcgattcgaccgagattgaggcgaactgtctccgcgaagcg
ctggatggcgtccgccgtcatggctgggcgcatcacagtcagcgtttgatggtgctgggc
aattgggctctgcagcgcggttgggatccgaatcagctcactgactggttcgtcgatgtt
tttgttgatgggaccgagtgggtaatgcccgccaatgtaataggcatgtcgcaatacgcc
gacggaggcatagtggcgactaagccctatgtttctggtggcgcctatatcaatcgaatg
tccgattattgtcggggttgtcggttcacgcccacagtacgtctgggtgaaaaagcgtgc
ccggtgacggccggttattgggcctttcttgaccgtgctgagccactgctccggggtaat
catcggatggcgcagcccctggcagggttgcgcagtctcgtcgaccgggaggctgttgtc
gatcaggagcggcggcgagagtcgtggtga
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