Rathayibacter toxicus WAC3373: APU90_05570
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Entry
APU90_05570 CDS
T04269
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APU90_05570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_05570
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
APU90_05570
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ALS57304
UniProt:
A0A0C5BCM3
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Position
1203173..1204384
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AA seq
403 aa
AA seq
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MQVRQLALSDFRNYHEADVVLEPGPNLFVGRNGQGKTNLVESLGYLSTLGSHRVSNDQAL
IRVGCDSAVIRTRLRSDERELRAEMQINRFSPNRAQINRGGIKPRELPRFFSSVLFAPED
LLLVRGDPSARRRFFDQLVVLLSPRMSAVQSDYERVLRQRNSLLKSARASGVGDSSKLGT
LDIWDERLISLGSDIMRSRLAVVEQLSEPVRRAYEEIAGTDQRPMLRSRLSIDGAIDDDG
EPTQERGTSFSSVTGDGIADTFAAALVTVRHRELDRGISLIGPHRDDVQFELNKLPARSY
ASHGESWSFALALKLGAAELLRRASPLGDPVLMLDDVFAELDTRRRAQLGSLIADYEQVL
ITAAVFDDVPEALVTHTVRIEAGRIVEPTVTPPSLERGESENG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaggcagctggctctgagcgacttccgcaattaccacgaggcggacgttgtg
cttgagccggggccgaacctttttgtggggaggaacggtcagggcaagaccaacctggtg
gagtcactcgggtatctgtcaactctcggttcgcaccgggtgtcgaatgaccaggcgctc
atccgtgtcggatgcgatagtgctgtcatccggacgcgactgcgcagcgacgagcgggaa
ttgcgggccgagatgcaaatcaaccgcttctcgcccaatcgcgcgcagatcaaccgcgga
ggcattaaaccgcgggaactaccgcgatttttttccagcgtgcttttcgctcctgaagac
ctccttcttgttcgcggcgatccgtcggcccgtcgacgcttcttcgatcagcttgttgtc
cttctctcgccccgaatgagtgctgtacagagtgattacgaacgggtgctgcgacagcgg
aattccctcctcaagtcggcacgtgcaagtggtgtcggtgactcctccaaattgggcacg
ctcgatatctgggatgaacgactgatttctctcggttcggacattatgcggtcacgactc
gctgtggtggagcagctcagcgagccggttcgacgtgcatacgaggaaattgctggcact
gatcagcgacctatgctgcgatcacgcctgagtattgacggcgcaatcgatgatgacggc
gagccaacacaagaaagaggtacctctttctcctccgtaacgggcgacggcatagcggat
accttcgctgcggcgctggttaccgtgcggcaccgagagctcgatcgcggcatttctctt
attgggcctcatcgcgacgatgtgcagttcgaactcaataagttgccggccaggagctat
gcgagccacggtgaaagttggtcgttcgccctcgcactcaaactcggcgccgctgagctg
ctgcgtcgcgcctcgccgttgggtgatccggtgttgatgcttgacgatgtttttgcggag
ctggatacgcgtcgccgcgctcaactgggttcgttaatagctgactacgagcaggtattg
atcacggcagcggtcttcgatgacgtgcccgaggcgttggtcacccacacggtgcggatt
gaggccggccggattgttgagccgactgtcacccctccgagcctggaacgtggggagtcg
gagaatgggtga
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