Rathayibacter toxicus WAC3373: APU90_05585
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Entry
APU90_05585 CDS
T04269
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rtc
Rathayibacter toxicus WAC3373
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtc03032
]
APU90_05585
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_05585
Enzymes [BR:
rtc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
APU90_05585
DNA replication proteins [BR:
rtc03032
]
Prokaryotic type
DNA Topoisomerases
APU90_05585
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APU90_05585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
KH_SLS1_1
Motif
Other DBs
NCBI-ProteinID:
ALS58291
UniProt:
A0A0U1PTB0
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Position
1207306..1209879
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AA seq
857 aa
AA seq
DB search
MGSDDGEEIVTETGVVIHEHDKIEPVDLQLEMQRSYLDYAMSVIVGRALPEVRDGLKPVH
RRVIYAMYDGGYRPDKAFSKCSRVVGDVMGQFHPHGDSAIYDALVRLVQPWSLRYPLALG
QGNFGSPGNDGAAAPRYTETKMAPLALEMVRDIDKNTVEFQDNYDGRTREPAILPARFPN
LLVNGSVGIAVGMATNIPPHNLREVAAGAKWALENPEASREELLEALLQRIKGPDFPTGA
QILGVRGIQDAYRTGRGSITMRAVVSIEEIQGRTCLVVTELPYQVNPDNLAIKIAELVKD
GRVSGIADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIVDGIP
RTLSLDGFIRAWVDHQVDVIVRRTQFLLDEAEARIHILRGYLKALDALDEVIALIRRSPT
VEQARDGLVELLDIDDGQARAILDMQLRRLAALERQKILDDHDRIQAEIKHYKLILDSPA
RQRKIIAEELEEIVDKFGDDRRTEILFGFDGDMSVEDLIPEEEMVVTVTRGGYLKRTRSD
SYRAQHRGGRGVRGAQLKADDIVEHFFVTTTHHWLLFFTNTGRVYRAKTYELQEAGRDAK
GQHIANLLALEPGEQIAQILDIRDYEAARYLVLATRDGLVKKTALAEYDTNRSGGIIAIK
LREGDELMSALLVEDDSDVLLVSRKGMSIRFTASDQALRPMGRSTSGVIGMSFRGDDSLL
DANVVNDEGSVFVVTEGGYAKRTGVSHYRLQGRGGLGIKVAKLEEKRGDLVGAIITRDDD
EVLVVLASGKVVRSAVAEVPAKGRDTMGVVFARFAEDDRIIALAKNTERNLDAQDEAPDA
MPSAESESVSEEDGSLE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atcggctccgacgacggcgaggaaatcgtcaccgaaaccggtgtcgtgatccacgagcac
gacaagatcgaaccggtcgatctgcaactcgagatgcagcgttcctacctggactatgcg
atgagtgtcattgtcggccgcgcgttgcctgaggtgcgcgatgggttgaaaccggtgcac
cgccgcgtgatttacgcaatgtacgacggcggttaccgacccgataaggcgttctccaag
tgctcacgtgtcgttggcgatgtgatgggccagttccatccacatggagactccgctatc
tatgacgccctggtgcgtttggtgcagccgtggagtctccgctacccgctcgcccttggc
cagggcaatttcggttcgcctggaaacgacggcgcagcggcaccccgctacaccgagacc
aagatggcgccgcttgcgctcgaaatggtccgcgacattgacaagaacaccgtcgagttt
caagacaactatgacggccgcacccgggagcccgcgatcctgccggcgcgcttccccaat
ctgctggttaacggttcggtaggcatcgcagtcggcatggctacgaatatcccgcctcac
aacctccgcgaggtcgcggccggcgccaaatgggcgctggagaacccggaggccagtcgc
gaggaactgcttgaggctctgctccagcggatcaagggccccgattttcccaccggtgcg
cagatcctcggggtacgcggcattcaggatgcttatcgcactggtcgcggttcgatcacg
atgcgtgcggttgtctcgattgaggagatccagggccgcacctgccttgtcgtcactgaa
ctgccctatcaggtgaacccggataacctcgcgataaagatcgctgagcttgtcaaggat
ggtcgcgtctcaggcatcgccgatattcgcgacgaaacatctggtcgcactggtcagcga
ctggtaattgtgctcaagcgtgatgcggttgcaaaagttgtgctgaacaatctttataag
cacacacagctgcaggaaaacttcggcgcgaatatgctagcgattgtcgacggtataccc
cgtacgctttcgctcgacggtttcatccgcgcgtgggtcgatcaccaggttgatgttatc
gttcgtcggactcaattcctccttgacgaagccgaggcgcgaatccacatcttgcgcggt
tatctcaaggcgctcgatgcgctcgatgaggtcattgcgctgatccgccggtcccccacg
gtagagcaggcgcgggatggtctcgtggaactactcgacattgatgacggccaggcgagg
gcaatcctcgatatgcaattgcgccgcctcgccgctcttgagcgccagaaaatactcgac
gaccacgatcggatccaggccgagatcaagcactacaagttgattcttgacagccccgcg
cggcaacgcaagatcatcgcagaggaactcgaggagatcgtagacaagttcggcgacgac
cgacgtacggaaatcctcttcggtttcgatggcgatatgagtgtcgaagacctcatccct
gaggaagaaatggtcgtcactgtcactcgcggcggctacctcaagcgtactcgcagcgac
tcctatcgggcgcagcaccgtggtggtcgtggtgtgcgcggtgctcagctcaaggcagac
gacatcgttgagcacttttttgtcacaacgacgcatcattggctccttttcttcacgaat
acgggccgtgtttatcgggccaagacttatgagttacaggaggcaggtcgcgacgccaaa
ggacagcacattgccaacttgcttgcgcttgagccgggcgagcagatcgcacaaattctc
gatatccgtgactatgaggctgcccggtatcttgtgcttgcaacacgcgacggactggtg
aaaaagacagccttggctgagtacgacacaaatcgttctggcggcatcatcgctatcaaa
ttacgcgagggtgacgagctgatgtctgcgctattggttgaggacgacagcgatgtgctg
ttggtctcccggaagggtatgtcgattcgcttcactgcttccgatcaggcgttgcgtccc
atgggccgttcaacgtcaggagtgatcggtatgtcattccgtggtgacgacagcctcctt
gacgcaaacgtggttaacgatgaaggctcggtcttcgtggtcacggagggcggttacgcc
aaacggactggggtgagtcactaccgccttcagggacgcggcggactaggcattaaggtg
gccaagctcgaggagaaacgcggagacttggtcggagcgattatcaccagagacgacgac
gaagtactcgtcgttcttgccagcggcaaggtggtacgctctgcggtggccgaggtaccg
gccaagggtcgcgacactatgggggtcgttttcgcacgattcgccgaagacgatcgcatc
atcgcactcgccaagaataccgaacgtaatctcgacgctcaggatgaggctcccgatgct
atgccgtcggcagagtccgagtcggtgtcggaggaggatgggtccttagaatga
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