Rathayibacter toxicus WAC3373: APU90_06465
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Entry
APU90_06465 CDS
T04269
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APU90_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA14
RHS_repeat
GLEYA
Phage_holin_3_6
DUF1889
Motif
Other DBs
NCBI-ProteinID:
ALS57455
UniProt:
A0A0C5BC84
LinkDB
All DBs
Position
1416327..1423316
Genome browser
AA seq
2329 aa
AA seq
DB search
MAFRRARALIIPTLAAVLSSALAVSVIDGASAQALNRASSTLRAEHVAHAEAAGADSLQK
VPLEASDPAALPELSPLTPTDPHVPVGEAAAPAQHSPAPSPDMEKSDDIGAFDAATAKVI
GRDEFTTTYTFGDKKVSDVSLTPSAVKNDAGDWVPVETELKTTGPAAWLGLGGAEVEQHP
LEPVFAEHADDAAVMSLSREGHSVGFALRGAGHSVLERDLSPWADKKTKSHLEYKNVFDG
VDLVYDVEKSNVKENLRLLHAPQKGEASWTWEVNAPGLSVEKDANGNIVFRDDQGSTVFA
MPAPILWDSSGTENKARADADGSVSLVNDGGKTLLQVSAPQGWLEDPQRVYPVYVDPTTE
TTVKDVTAFKSNGKTSHGMTQVGNTNTSGVWRSIAHFDYESAVAGKQVVGANIGVTYIHD
GTNGTYTGGVHDVNSYGFNGAGAQLASLTVSEQGGNTGWDDRLGEKFAEWARNGVSGGNL
LVGGDERGGVYSYRWVDLHLWLATKEFPRAGWNPLPADRLENQTLTPTLHADAEYDPTGA
GLNHLYRVSKNPNPDIDTRYDSGWGAGSEQKIPANYLEPNTWYYWRVWVHDNANNYYGTS
TIRESQVFSFKTTDPPLPAQNTTSPADKSVIVSTTPRLQVGPIGNSNLKEYAFRIATGTD
ATTGQVAVSGWRTDPWWDVPASILQDGSTYTWTVLTRDKQNNEWGPFWVNRLTVNERITS
AGPAPTDSAGPVTVNLANGNVSMGFNSPSLTTVGGEIGMKFTYNSKKAVNTGFLGRYYNY
SGSDNPPSDFSGTNIKQILQRTDSQLNFDWGAGSPGEGVNSDNFMARWTGFLRVPEPGPW
EFAATRDDGVIVTIGANGDNAGTKVIDQWNLAHEDPVWNGPSVTINGAVPIDVKYFERAT
DAGMKLWIRKVGTTTASLIPADWVTSSRSILPGGWSSSSPLAGDLHAFAKAEVKEGSIVF
TDVSGDTHTYTKKSAGGYSPPAGESGVAAIDNDGAASLTDGGGVVTVFNRDGTVAALTSP
DEVKKPTSPVVSYRPNGLVDRISDRLSGTSSGSTTTYSRSMRFVYQGDTASSLGLDAGEN
WPGTSNLCPTDSTTSPAYVPAPTGMLCRILYPNHTVNSFLTDTTLLYDASGNLVRINDPG
NEVTTFVYDGAGRVTGVRNSLANEWITAVSPASSGLALTRTEIAYDAAGRPSSVTLPAPD
GATDQARPRKTYQWPTDGNLVTTVDVAGLTVPATEPSRGHAVTVSYDSAYRTLSTATASG
LETHTEWTSSDLQLSATSPQGLKSTVFYDHADRPYEKFGPAPTACFENNRPTAACPGTGH
STTTYDGGMKGLSASYFANNQLSGVPVAYGLGEESTGKIAMDWGAGAPAGITSDQFSARY
TGSIVIPQAGDWYFKTIADDGTRLWIDNVMRIDDWVSQSRHWSLPGHIHVDADNTVLPIR
LDYLENGGDAHLELNWSRDPNSDFTWVPGSQMKPDYSLTTSTTTEDGVTLAPNGAATATT
AVTSSTVGSDYGSEPWLGLLNTSTVDPGGLNLTTKTTYEKGGYNRRTGKTLPAATAADAT
AETAGTSWSYYSEKEGYGSALGLTNAVCGLPLTTPQYGMLKQTTGAKTGGTDTAVMTQYV
YDLMGRVVGAKQSGDSDWTCTTYDSRGRSVSVTYPATDTVAARTVTHRYTSDGTSGGDPR
VVVVADSSVTGSPTDGTVTTVTDLLGRTTKYTDVWNVVTETTYDLTGNVAQIRTMKDASV
LSTQTFEYDLDSKVTAVKLNGADMARVSYGSATSATVLERGQVTGVTYPAAGAGNGTSLA
GITRNTRTGAQTGLTWKFPAGSSATVSDAVLRSQSGRIVQDKTTDAGAVYQSDYSFDAAG
RLTNAVIPHHTLTYGYGDSSCDTAAYPGAVVRAGKNSNRTSYTDVAALPSGTTTTSTAYC
YDAADRLLGSTITSGAAAPGSNAVADGLVGSEVAYDTGGNTTRLGDETITYDSADRHLST
VTPSGSVSYLRDAFDRVVSRTQTVAGKSGVVRFGFTGGSDTPDVILDDANTVKESIFSLP
GGVVVSVPVSGAETWSYPNLHGDVIVTADGDGVRAKNSSGAQLGVALYDPFGQSIDPVTF
LVGTVAADDSVVKNRAGADADYGWLGQHQKLTEHVGSIATIEMGARQYVAALGRFLEIDP
VEGGVDNDYGYPSDPINVLDLGGTFAQFLAIGVAVGAGNSWNPVGWAILITVGVLAAGAL
LTMAIAQARSVPFPSHTTKTAKKYKDTKYIVYQIYNKGATWKYGITRRGDERPNSQLGAC
ARYYGSPCEHRKMRETRGYFWARAWEAGYINSYRSRHGHCPPGQRVSCR
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
gtggcctttcgtcgtgcgcgcgcgctcatcattcctactctcgccgcggtgctcagctcg
gccctggccgtcagcgtcattgacggcgcttctgcccaggcgttaaatcgtgcgtcgtcg
acgctgcgcgctgagcacgtggctcatgcggaagcggccggagccgatagcctccagaag
gtgccgctggaagcctcggatcctgcggccctccctgagctctctccgctgacaccgacg
gatccccatgtgccggtcggtgaggccgctgcgcctgctcagcactcgccagcgccctct
cctgacatggagaagtcagacgatattggcgccttcgatgcggcgaccgcgaaggtcatc
ggtcgggatgagttcactaccacctacacctttggtgacaaaaaagtttcggacgtgtcc
ctaaccccctccgcggtgaaaaacgacgccggtgactgggttccggtagagacggagctg
aagaccaccggtcccgccgcatggctgggactgggtggcgctgaagtcgagcagcatccc
ctggaaccggttttcgctgagcatgccgatgatgccgcggttatgtctctgtctcgcgag
gggcattcggtgggtttcgctcttcgcggcgcaggccatagcgtgctggagcgtgacctg
tcgccgtgggcggataagaaaacaaaaagtcatctcgaatacaagaatgtttttgatggc
gtcgatcttgtgtatgacgtcgagaaatctaatgtcaaagaaaatttgcgtctgcttcat
gctcctcagaagggcgaagcgtcatggacgtgggaggttaatgcccccgggcttagcgtc
gagaaggatgccaacggcaatatcgtcttccgcgacgatcaagggtccaccgtcttcgcg
atgcccgcgccgattctctgggattcctccggaaccgagaataaggctcgagcggacgcc
gacggttcggtttctctggtcaatgacggagggaaaaccctccttcaggtgtcggctccc
caggggtggttggaggatccgcagcgggtgtacccggtgtatgtcgatccgacgacggag
acgacggtcaaggatgtgacggcgttcaaatcgaatggcaagaccagtcacggaatgacc
caggtggggaacacgaataccagcggagtatggcgttccatcgcacactttgattacgag
tctgctgttgctggcaaacaggttgtcggtgcaaatattggtgtcacctatattcatgac
ggcacgaacggaacctataccggcggggtgcacgatgttaattcgtatggatttaatgga
gcaggcgcgcaactggcctcgctgaccgtttctgagcaaggtggcaataccggctgggat
gatcggctgggggagaaatttgccgagtgggcccgtaatggcgtgtcaggcggcaacctt
ctcgtcggtggggacgaacgcggaggggtgtactcctatcgttgggtcgatctgcatctc
tggttggcgacgaaagagttccctcgggcgggatggaatccccttccggcggatcgtctc
gagaatcagactctcacgccgacgctgcatgcggatgccgaatatgatccgaccggcgca
gggctgaatcacctctatcgggtgagcaaaaaccccaaccctgatatcgacacgcgatac
gattctggctggggtgccggtagtgagcaaaagattcccgcgaactatctggagcctaat
acctggtattactggcgagtgtgggtgcacgacaatgccaataattattacggcacaagc
acgatcagggaaagtcaggtatttagtttcaagacaaccgatccacccctcccggcgcag
aatacaacgagcccggccgataaatcggttattgtctcgacgactccgcggctccaggtt
gggcccatcggtaattccaacttgaaggaatatgccttccgcattgcgaccggtacggat
gcgaccaccggccaggttgcggtctccggctggcggaccgacccgtggtgggacgttccg
gcgtcgattcttcaggacggttcgacctacacctggacagtgctgactcgcgataagcag
aacaacgagtggggcccgttctgggtcaaccggctcaccgtgaatgagcggattaccagc
gctgggccggcaccgacggattcggccggacccgtcacggtgaatcttgctaatggcaac
gtcagcatgggttttaattcgccatcgctgacgacggtcggcggcgaaatcgggatgaaa
tttacctacaactctaagaaagccgttaatactggttttctcgggcgctattacaattac
agtgggtcggataatcctccttctgatttctcgggcacgaatatcaagcaaattcttcag
cgcaccgattctcagctcaattttgactggggtgctggttcgcccggcgagggtgtgaac
tctgacaactttatggcgcgatggaccgggttcctccgggttcccgaaccggggccgtgg
gaatttgcagcgacccgtgatgacggcgttattgtcaccatcggcgcgaacggcgataac
gcgggcaccaaggtgattgaccagtggaatctggcgcatgaggatccggtatggaacggt
ccgagcgtcaccatcaacggcgctgtgccaatcgacgtgaagtattttgagcgggcgacc
gatgccggaatgaaactctggattcgtaaagtcggtacgacaacggcttctctcatcccg
gcggactgggtgacgtcatcgcggtcaattctgcccggcggctggagcagctcgtcgccg
cttgcgggcgatctgcacgccttcgcgaaagctgaagtgaaggaaggctccattgtcttc
accgatgtgagtggagacacgcacacctatacaaagaaatccgccggtggatattcacca
cctgccggagaatccggtgtcgcagcgattgataatgatggtgccgcgtcgctgaccgat
ggcggcggtgtcgtgacagttttcaaccgtgacggaactgtcgctgcgttgacgagcccg
gatgaggtgaagaagccgacttctcccgtcgtctcttaccgtcccaacgggttggtcgat
cgtatttctgatcgactttccggaacgtcctccggctcgactaccacgtattcccggagc
atgcgttttgtctatcagggagatacggcttcgagtcttggtctcgatgctggtgagaat
tggccgggtacctcgaatctgtgcccgacggattcgaccactagtcctgcctatgttccg
gcaccgacgggaatgctgtgtcgtattctctatccgaatcacactgtcaattccttcctc
actgacaccacgttgctctatgacgcctcgggaaatctggttcgcatcaatgatccaggc
aatgaggtcacaaccttcgtgtatgacggagcaggcagggtcaccggtgtccgcaatagc
ctggctaatgagtggattaccgctgtctctccggccagtagcggtctcgcgttgacccga
accgagattgcctatgacgctgcggggcgcccgtcgtcggtgacgctgcctgctccggac
ggggcaaccgaccaggcacgcccgcgcaagacgtatcagtggcccaccgacggcaacctg
gtcacgacggttgatgttgccgggctcactgtgcccgccaccgagccgtcacgcggccat
gcggtcaccgtcagttatgactctgcgtaccgcactctcagcacggcaaccgcatcgggg
ttagaaacacacacggagtggaccagcagcgacctgcaattgtcggcgacatcgccgcag
gggctgaagtcgacagtcttttacgatcatgctgatcggccgtacgaaaaatttggtccg
gctccgacggcatgttttgagaacaacaggcccaccgccgcctgcccgggtaccggtcat
tccaccaccacctatgacggcgggatgaaggggttatcggcgagctatttcgcgaataac
cagctgtccggtgtgccagtggcctacggtctcggtgaagaatcaaccggaaaaattgcg
atggattggggtgcgggagcgccggccgggataacctccgatcaattctcggcgcgatac
accggcagcattgtgattcctcaggccggagactggtatttcaagaccattgccgatgac
gggacacgcctgtggatcgacaatgtgatgcggatcgacgactgggtatcgcagtcgcgt
cactggtcgcttcctggccacattcacgtggacgccgataacaccgttttaccgattcgt
cttgattacctcgagaacggtggggatgcgcatctcgagctgaactggtctcgtgacccg
aacagtgacttcacctgggttccgggaagccagatgaagcctgattacagcctcaccacc
tccacgacgaccgaggacggcgtgacgttagcgccgaacggcgctgcgacggcgacaaca
gctgttacttcatcaacagtggggtctgactacggttctgagccgtggctggggttgctg
aatacatcgaccgtggatcctggtggactgaatctcacgacgaaaaccacgtatgaaaag
ggtggctataaccggcggaccggaaagacgcttccggcggcgactgcggcggatgccacg
gcagaaactgcggggacatcgtggtcgtattacagcgaaaaggagggttacggcagcgcg
ctcggtctgactaatgcggtctgcggtcttccgctcactactccgcaatacgggatgctg
aaacagaccaccggagcaaaaacgggtggcactgacactgccgtgatgacccagtatgtc
tacgacctaatgggtcgtgtcgtgggtgctaagcagtcgggggacagtgattggacctgc
acgacatatgacagtcgtgggcgtagcgtcagcgttacctatccggcaaccgacacggtc
gcggcccgaactgtcacccacaggtacaccagcgatggcacctctggcggcgatccgagg
gtggtggttgttgccgattcgtcggtgacaggttcaccgacggacggcacagtcaccacc
gttactgaccttctcggacgtaccaccaagtacaccgacgtctggaatgtggtgaccgaa
acgacatatgacctcaccggcaatgttgcgcagatccggaccatgaaagacgcgtcggtt
ctttcgacccagactttcgagtatgacctggatagtaaggtcaccgcggtaaaactcaac
ggcgccgatatggctcgggtgagctatggttcggcgacctccgcgacggtgctggagcgc
ggtcaagtgacaggcgtgacgtatccggccgcgggtgcggggaacggtacgagtctggcc
ggaattacccgtaacacgaggactggcgcgcaaactgggttgacctggaaattcccagca
gggtcgagcgcgaccgtatctgatgcggtgctccggtcgcagtccgggcgaattgtgcag
gataaaacgaccgatgcgggtgccgtttatcagtcggattattccttcgatgccgccggg
cgtctgacgaatgctgtcattccgcaccacaccctcacttatggttatggcgattcgagc
tgcgatactgcggcatatcccggagctgtcgttcgggcaggaaagaacagtaatcgcacg
agttacaccgacgttgccgctctacccagcggaacgacgacaacctcgacggcatattgc
tatgacgctgctgatcggctacttggttcaacgatcacgagtggggcggctgctcctggt
tcgaatgcggttgctgatggtcttgtggggtctgaggtggcgtatgacactggcggtaat
accacgcggttgggtgatgagacgatcacctatgattcggcggatcgtcatctgtcgacg
gtgactccgtcgggaagtgtttcttatcttcgggatgcttttgatcgggtggtgtctcgg
acgcagacggtggcggggaagagtggtgtggttcggtttgggtttaccggtgggtcggat
actccggatgtcattttggatgatgcgaataccgtgaaggaaagcattttttctcttccg
ggtggggttgtggtgtctgtgccggtaagcggcgcggaaacgtggtcctatccgaatctg
catggtgacgtgattgttactgctgatggtgacggtgtgcgggcgaagaattcgtctggt
gcgcaactcggtgttgctttgtatgacccgtttggtcaaagcattgatccggtgacgttc
ctggtgggaacggtcgcggccgatgactcggtggtgaagaacagggcgggagcggatgct
gattatggctggttgggtcaacatcagaagctgaccgagcatgttggttctattgccacg
atcgagatgggcgcgcgacagtatgtcgcggcgctggggcggttcttggaaattgatccc
gttgaagggggtgttgacaatgattacggatatccatccgatccgatcaatgttctcgat
ctcggtggaacttttgcgcagttcctcgctatcggcgtcgctgttggtgctggtaattcc
tggaacccggtgggttgggcaatattaataactgttggtgtactcgctgctggcgccctt
cttacgatggccattgcacaggcgaggagtgtaccgtttccgtcccacaccacaaagacc
gcaaagaaatacaaagacacaaagtatattgtgtatcaaatatataataaaggtgccacg
tggaagtatgggataactcggcgcggcgacgagcggcctaattcgcagctcggggcatgc
gcgaggtactatggttcaccgtgcgaacatagaaaaatgcgtgaaactagaggatatttt
tgggcacgagcctgggaggcgggttacattaacagctatcgcagtcggcatggtcattgc
ccgccgggacagagagtgagttgtcgatga
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