Rathayibacter toxicus WAC3373: APU90_07025 Help Entry APU90_07025       CDS       T04269                                  Name (GenBank) hypothetical protein   KO K01728   pectate lyase [EC:4.2.2.2] Organism rtc  Rathayibacter toxicus WAC3373 Pathway rtc00040   Pentose and glucuronate interconversions rtc01100   Metabolic pathways rtc02024   Quorum sensing Brite KEGG Orthology (KO) [BR:rtc00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     APU90_07025  09140 Cellular Processes   09145 Cellular community - prokaryotes    02024 Quorum sensing     APU90_07025 Enzymes [BR:rtc01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      APU90_07025 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix Motif Other DBs NCBI-ProteinID:  ALS57552 UniProt:  A0A0C5BIP3 LinkDB All DBs Position complement(1548009..1549079) Genome browser AA seq 356 aa AA seqDB search MNPVLRSIALLALFVLVGAINFTSREFPATAVPHAPSSQEVRSNKTTDEITGATTLPTIS EDSPRTEANSVDTLANAVAQHAHHIVITKSLYGGPVPIQITLRDPKGSNTVIEGVNGTTK LINIQIRIIDNSYSGAIHDLIVRNLTLHGNISDLTNLSGSHTVAPGTGPNYEAVSIRGAR NVLIDHITAYDTTDDLMSVTSQADQVTISNCTLFYSRSFADINPSIRWNWGFGPQPLAEE RLGILVGKGRSDGYLYTNKLHVTLSHNHIGPLVRGRPLLRGNVHVVGNTFDNTQPHSGQY ATIEVGSGGYVLVEKNTFDYSHNPIVIHLDSPNDPYALYVQNNNKFISTTGTIRIG NT seq 1071 nt NT seq  +upstreamnt  +downstreamnt atgaatcccgtattgcgctctattgctctcctcgccctatttgtcttagtcggtgctatt aattttacctctcgagaatttccagctaccgcagttccgcatgccccgtccagtcaggaa gtgaggtcgaataaaaccaccgacgaaataactggagcaaccacacttccgaccatctca gaggacagcccgcggacggaagcgaacagcgtcgacaccctcgccaacgctgtcgcgcag cacgcgcaccacatcgttattaccaagtccctctacggtggcccggtgccgatccagatc accctccgcgaccccaaaggaagcaatacggtgatcgagggtgtaaatggtacgacgaag ttgatcaatatccagatccgcattattgataactcttactctggcgccatacatgacctt attgtccgtaatcttacccttcacggcaacatcagcgatctgacgaacctctccggttca catactgtggcccccggtaccgggccgaactatgaagcggtgtccattcggggtgctcgg aacgttcttatcgaccacatcaccgcgtacgacactacggatgatctgatgtccgtcacc tctcaagcagatcaagtcactatctcaaactgcacattgttttatagccgttcttttgcc gatattaacccttcaatcaggtggaactggggattcggcccacaacctttagccgaagaa cgattgggcatcctagtgggtaagggaagatctgacggctatttatacacaaataaactg catgtcacactttctcataaccacatcggaccattggttcgtgggcggccgcttttgcgc ggcaatgttcacgttgtgggtaacactttcgacaatacccagccacattccggtcagtac gcgacaattgaggtaggtagcggcggttacgtcctcgtcgagaaaaacaccttcgactat tcacacaaccccatcgttatccatctcgattccccaaatgatccctatgcactttatgtg caaaataacaacaaatttatcagtaccaccggaactatcaggataggatag

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