Rathayibacter toxicus WAC3373: APU90_08045
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Entry
APU90_08045 CDS
T04269
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00020
Citrate cycle (TCA cycle)
rtc00190
Oxidative phosphorylation
rtc00650
Butanoate metabolism
rtc00720
Other carbon fixation pathways
rtc01100
Metabolic pathways
rtc01110
Biosynthesis of secondary metabolites
rtc01120
Microbial metabolism in diverse environments
rtc01200
Carbon metabolism
Module
rtc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rtc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
APU90_08045
00650 Butanoate metabolism
APU90_08045
09102 Energy metabolism
00190 Oxidative phosphorylation
APU90_08045
00720 Other carbon fixation pathways
APU90_08045
Enzymes [BR:
rtc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
APU90_08045
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4
Fer4_6
Fer4_2
Fer4_20
Fer4_16
Fer4_18
Fer4_4
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ALS57723
UniProt:
A0A0C5BG54
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Position
complement(1744565..1745326)
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AA seq
253 aa
AA seq
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MSTATIAERPAGPAAPEAFTVTFVIRRYNPEADTEPRWQDFDVEMYSTDRVLDALHRIKW
EQDGSLTFRRSCAHGICGSDAMRINGRNRLACKTLIKDLDISQPIYIEAIKGLPLEKDLV
VDMEPFFASYREVQPFLIATTPAPQGKERIQSASDRARFDDTTKCILCAACTSSCPVFWT
DGQYFGPAAIVNAHRFIFDSRDDAGGTRLDILNDKEGVWRCRTTFNCTEACPRGIQITQA
IAEVKQAVIRGRV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccgccaccatcgccgaacggcccgctggccccgcggcacccgaagcctttacc
gtcaccttcgtcatccgccgctataaccctgaggccgataccgagccgcgctggcaagac
tttgacgtcgagatgtattcgaccgaccgcgtcctcgatgcgctgcaccgcattaagtgg
gagcaggacggctcgttgaccttccgccgttcctgcgctcacggcatctgtggctccgac
gccatgcgtatcaatgggcgtaaccgtctggcatgtaagacgctgattaaagacctcgac
atttcgcagccaatttacattgaggccattaagggattaccgctcgaaaaagacttggtc
gtcgatatggagcctttcttcgcctcataccgcgaagtgcagccctttttaattgctact
actcccgcaccgcagggcaaggaacgcatccagtcggcgtccgaccgtgcccgctttgac
gacaccaccaagtgcattctttgtgccgcctgcacctcgtcgtgtcccgtgttttggacc
gatgggcaatacttcggccccgccgcgatcgtgaatgcgcatcgcttcattttcgactcg
cgcgatgacgcgggcggcacccgtctcgacatcctcaacgacaaggaaggcgtgtggcgc
tgccggacgaccttcaactgtacggaggcgtgcccgcgcggcatccagatcacccaggcc
attgccgaggtcaagcaggctgtgatccgcggtcgcgtctga
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