Rathayibacter toxicus WAC3373: APU90_08805
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Entry
APU90_08805 CDS
T04269
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APU90_08805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_08805
Enzymes [BR:
rtc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
APU90_08805
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
APU90_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
Motif
Other DBs
NCBI-ProteinID:
ALS58351
UniProt:
A0A0C5BH28
LinkDB
All DBs
Position
complement(1925901..1926137)
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AA seq
78 aa
AA seq
DB search
MDSPVTEETESDISGYSYEQARDELVRVVSELEQGNSTLERSLALWERGEAVAARCEEWL
LGARARLDAARVGETSAG
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atcgactcccccgtcaccgaggagaccgagtccgatatctccggatattcctacgagcag
gcccgcgatgaacttgtccgtgtggtctccgagttagaacagggtaattcgacgctcgaa
cgctcactcgcgctctgggaacgtggcgaagccgtggccgctcgctgcgaggagtggcta
ctcggcgcacgagctcgcctcgacgcggcccgcgtcggtgaaacgagcgccggatga
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