Rathayibacter toxicus WAC3373: APU90_08920
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Entry
APU90_08920 CDS
T04269
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc01501
beta-Lactam resistance
rtc02010
ABC transporters
rtc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
APU90_08920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APU90_08920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
APU90_08920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtc02000
]
APU90_08920
Transporters [BR:
rtc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
APU90_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALS57870
UniProt:
A0A0C5BI15
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All DBs
Position
1954552..1956171
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AA seq
539 aa
AA seq
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MNIRRYGFGALALVAASTLVLAGCSGSGSSGNGASGSNPAAIISTNGSEPQNPLIPTNTN
ETGGGLILDQIFAGLVVYDAKGRPQNDGADSIKSDDSQNYTIKLKSGQKFTNGEPVTAHS
FVDAWNYGAKASNKQRVSSFFSNIQGYSETQDSELTGLKVVDDTTFTVALNAPQSDFPLS
LGYSAFYPLPAAAFADMAAFGQKPIGNGPYKLDGDNAWKHNVEIDLVTNKEYSGPRAPKN
GGLKINFYATLDAAYSDLLGGNVDVIDKIPDSAFATFKGDLGDRAVNQPAAYVQSFTIPQ
RLAHFSGEEGRLRRRAISLAFDRKEIAKVIFDNTRTPAVDFTSPVIDGWTDKLSGADVLT
YSPDEAKKLWAQADAISPWSGTFTLAYNADGGHQGWVDAVTNSIKNTLGITAQGEPDPTF
AQLRTKIVSRSIQTAFRSGWQADYPSLNDFLRPNYVTGGSSNDGDYSNPEFDSLVAAGLS
DTNNTSANQKFQQAQEILLKDLPVLPLWYQNVTAGFGTSVANVEFGWDSVPLFYQITKN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcagacgatacggcttcggagcattggcgctcgttgccgcgagtacgttggtt
ttagcgggctgcagcggttcgggaagctccggtaatggcgcttcgggaagcaacccggca
gcgattattagcaccaacggatccgagccgcagaacccgctgattcccaccaacacgaac
gagacgggcggcggtctgattctcgatcagattttcgcgggtttggtcgtttacgacgct
aagggtcggccgcagaacgatggcgctgactcaattaaatcggatgattcacaaaattac
acgattaagctgaagtccggtcagaaatttaccaacggggagccggtcacggcgcactcg
tttgttgacgcgtggaactatggcgctaaggcgtcaaataagcagcgtgtctcctcgttt
tttagcaatattcagggttatagcgaaactcaggacagtgagttgaccggtctcaaggtc
gtggatgacaccaccttcacggtcgcgctcaacgcgccgcagtcggattttccgctcagt
ctcggctattcggctttctacccgttgcccgcggccgcttttgccgatatggctgctttt
ggtcagaaaccgatcggtaacggcccgtataaacttgacggtgacaacgcgtggaagcac
aacgttgaaatagatttggtcactaacaaagagtactccggcccgcgtgcaccaaagaat
ggtggtctgaagatcaacttttatgccaccctggatgcagcatattccgaccttctcggt
ggcaacgttgatgtaatcgataagattcccgactcggcttttgctactttcaagggcgat
ctcggcgatcgtgctgtcaatcagcccgcggcgtatgtacagagttttactattccgcag
cgtcttgcacactttagtggtgaggagggtaggctgcgtcgacgcgccatttctttggcc
tttgatcgcaaagagattgccaaggtaatttttgacaacactcgcacgcccgccgttgac
tttacgtctccggtgatcgatggctggaccgataagctcagtggtgccgatgtcctcacc
tacagccccgatgaagccaagaaactgtgggcgcaggccgatgccatcagtccctggagc
ggtacctttacgctcgcctataacgccgatggtggtcatcagggttgggttgatgcggtc
actaactcgattaagaacacattaggtattactgctcagggcgaacctgaccccaccttc
gctcagctgcggaccaagatcgttagtcgttctatccagaccgcgttccgtagtgggtgg
caggccgattatcccagcctgaacgatttcctcaggccaaactatgtcaccggtggctcg
tcgaacgacggggactattcgaaccccgagttcgattccctcgtcgccgctggtctttcc
gacacgaacaacacgtcggcgaaccagaaattccagcaggctcaggagattctgctcaag
gaccttcctgtgctgccgctctggtatcagaacgtgactgcaggcttcggtacgtctgtg
gctaacgtcgagtttggttgggattcggttccgctcttctaccaaatcaccaagaactga
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