Rathayibacter toxicus WAC3373: APU90_09310
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Entry
APU90_09310 CDS
T04269
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rtc
Rathayibacter toxicus WAC3373
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtc03016
]
APU90_09310
Enzymes [BR:
rtc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APU90_09310
Transfer RNA biogenesis [BR:
rtc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APU90_09310
Prokaryotic type
APU90_09310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ALS58366
UniProt:
A0A0C5BH20
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All DBs
Position
2042068..2043000
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AA seq
310 aa
AA seq
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MSGPAASAPSGILLLDKPSGITSHDLVSLTRRRAGTRKVGHAGTLDPMATGVMILGIGSS
TRLLTYLVGLDKTYEATIRLGASTSTDDREGELLTRAEPGRVAALSPQAVTAAIALLTGP
IEQIPSSVSAIKVDGRRAYARVRAGEEVVLSSRPVTVSAFEVRDRRVQRGFLDLDVRVAC
SSGTYIRALARDLGLALGVGGHLTALRRTKIGPFAVTEAAALDDLDVASAVLSPIAVAGK
LFPLLRLSAQEAADLANGKRITVPEAAVSVKGLLAAVGPGERLIGLAERRGAQLVSTVNF
PSEQFRTVTP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atatccgggcctgcggcgtcggcccctagcggcattctcttgctggataagccgagcggc
atcaccagtcatgaccttgtttcgctcactcgacgtcgtgcggggacacggaaagtcggc
catgccgggactctggatccgatggctaccggtgtgatgatcctgggaattggttcctcg
acacgtttgctcacctatctggtgggcctggacaagacttatgaggcgactattcgtctt
ggtgcctcgacgagcaccgacgatcgcgagggtgagctgcttacccgcgccgagcctggc
cgcgttgccgctctttctccgcaggcggtgaccgcggccattgctctcctcaccggcccg
atcgagcagattcccagttccgtcagcgccatcaaggttgatggtcggcgcgcttatgcg
cgggttcgtgccggggaggaggtggtgctgtcgtcgcgcccggtgaccgtctcggccttc
gaggtgcgtgaccgccgcgtgcaaaggggcttccttgacctcgatgtgcgcgttgcctgt
tcgtctggcacctatattcgggcgttggcgcgggatctcggattggcactcggggtcggt
ggtcatctgacggcacttcgacgaacgaaaattggtccgtttgccgttactgaggcggct
gcacttgacgacctagatgtcgcctccgctgtgctgtcaccgatcgcggtcgcaggcaaa
ctgttcccgctgctgcgcctgagcgcgcaggaggcggccgacctcgcgaacggtaagcgg
atcacggtaccggaggcggccgtgtcggtgaagggcctgcttgccgcggtgggcccaggg
gagcggcttattggtcttgctgagcgtcgcggagcacagctggtgagcaccgtgaatttt
ccctccgagcagttccggacggtgacgccatga
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